Gene Information

Name : exeF (ASA_3777)
Accession : YP_001143486.1
Strain : Aeromonas salmonicida A449
Genome accession: NC_009348
Putative virulence/resistance : Virulence
Product : general secretion pathway protein F
Function : -
COG functional category : N : Cell motility
COG ID : COG1459
EC number : -
Position : 4071876 - 4073042 bp
Length : 1167 bp
Strand : +
Note : -

DNA sequence :
GTGACCGAGGGCGATTCGGCCCGTCAGGTACGCCAGCAACTGCGCGAGCAGGGGCTGACCCCGCTCGAGGTGAACGAGAC
CACAGAGAAGGCAAAGCGGGAAGCGAATCGCTTCGTGCTGTTTCGCCGTGGTGCCTCCACTTCCGAGCTGGCCCTCATTA
CTCGCCAGTTGGCGACCCTGGTGGGTGCAGGCCTGACTATCGAAGAGGCGCTGCGGGCAGTGGCCGAGCAGTGCGAAAAG
GCCCACCTGCGCAGCTTGGTGGCAACCGTGCGCAGCAAGGTCGTAGAAGGCTACTCGCTGGCCGATTCGCTGGGGGCCTT
CCCCCACGTGTTCGATCAGCTGTTCCGCTCCATGGTGGCGGCAGGGGAGAAGTCCGGTCATCTGGAGAAGGTGCTGAACC
GGCTCGCCGACTACACGGAGCAGCGCCAGCATATGCGCACCAAGCTGCTGCAGGCGATGATCTACCCCATAGTCCTCACT
CTGGTGGCGGTCGGGGTCATTTCGATCCTGCTCACTGCCGTGGTACCCAAGGTGGTGGCCCAGTTTGAACACATGGGCCA
GCAGTTGCCTGCGACGACCCGTTTCCTCATCGGCACCAGCGAGCTGATGCAGCATTACGGCCTCTGGTTCCTGCTGCTGC
TGTTCCTGGGGGGCTTTGTCTGGCGCTGGTGGCTGACCGACGAGAAGCGTCGCCGTCACTGGCATCAGGTGATACTGCGC
CTGCCGGTCATCGGCCGGGTCAGCCGTGGTCTCAACACGGCCCGCTTCGCCCGCACCTTGAGCATCCTCAATGCCAGTGC
CGTGCCCTTGCTGGAGGGGATGAAGATCGCCGGCGAAGTGCTCTCCAACGACTTTGCCCGGACGCGCATTGGTGAGGCCA
CCGAACGGGTACGTGAGGGGACCAGCCTGCGCAAGGCGCTGGATGAAACCAGGATTTTTCCGCCCATGATGCTGCACATG
ATCGCCTCCGGCGAGCAGAGCGGCGAGCTCGACAACATGCTGGAGCGGGCGGCGGACAACCAGGACAGGGAATTTGAAAC
CCAGGTTAATATCGCCCTCGGCGTGTTCGAGCCCCTGCTGGTGGTCTCCATGGCCGGGGTTGTGCTGTTTATCGTGATGT
CGATCCTGCAGCCGATCCTCGAGCTCAACAATATGGTCAATCTCTGA

Protein sequence :
MTEGDSARQVRQQLREQGLTPLEVNETTEKAKREANRFVLFRRGASTSELALITRQLATLVGAGLTIEEALRAVAEQCEK
AHLRSLVATVRSKVVEGYSLADSLGAFPHVFDQLFRSMVAAGEKSGHLEKVLNRLADYTEQRQHMRTKLLQAMIYPIVLT
LVAVGVISILLTAVVPKVVAQFEHMGQQLPATTRFLIGTSELMQHYGLWFLLLLFLGGFVWRWWLTDEKRRRHWHQVILR
LPVIGRVSRGLNTARFARTLSILNASAVPLLEGMKIAGEVLSNDFARTRIGEATERVREGTSLRKALDETRIFPPMMLHM
IASGEQSGELDNMLERAADNQDREFETQVNIALGVFEPLLVVSMAGVVLFIVMSILQPILELNNMVNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspF YP_854405.1 type II secretion protein GspF Not tested PAI I APEC-O1 Protein 1e-99 57
gspF CAE85232.1 GspF, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-98 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
exeF YP_001143486.1 general secretion pathway protein F VFG2049 Protein 1e-93 56
exeF YP_001143486.1 general secretion pathway protein F VFG0181 Protein 2e-85 49
exeF YP_001143486.1 general secretion pathway protein F VFG1870 Protein 1e-77 42