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Name : fimD (ASA_3728) Accession : YP_001143437.1 Strain : Aeromonas salmonicida A449 Genome accession: NC_009348 Putative virulence/resistance : Virulence Product : type I pilus chaperone protein FimD Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 4020533 - 4021264 bp Length : 732 bp Strand : + Note : - DNA sequence : ATGAAAAAGCTGCTCTCTTTTACCTGTCTGGCCGTACTGGGTATGACGTCACTGAACGTCAGTGCCGCAATTGTGCTGGA TCGTACTCGCGCCGTTTATCCTGGTGGCGCCAAATCCATCAGTCTCAACATCAAAAACGAAAATCAGAAGCTGCCTTATC TGGCGCAGGCCTGGATTGAAGATGCCCTGGGGCAGAAGATCGTTTCGCCTTTCGTGGTGCTGCCGCCAGTGCAGCGGGTG GATGCCAATCAGAAGTCGATTGTCAGGATCGCCTCTGTGCCTGCGATCGAAACGTTGCCAAAAGATCGCGAATCTATCTA CTACTTCAACCTGCGCGAGATCCCGCCCAAGAGCGAGAAGAGCAACGTCATGCAGATTGCCGTGCAATCCAAGATCAAGC TCTTCTACCGCCCAGAGGCTATCCTCCCTGAGCGTGGTGCCGTCTGGCAGGATCAAGTGACGATCACCAAACAGGGCACA ACCCTGAAGGTCAATAACCCGACCCCTTACTACGTCACCTATGTCGGTCTGGCTCATCCCAAGGGCAAAGAAAAAACATC TATTAAAGGCTTCTCTGCCTTTATGGTGGCCCCCAAATCCGAGCTGGATGCCAAGATCCCCGAGACGTTGGGCAGTGAAT TCATCATCAGCTATGTAAACGATTACGGCGGATATATGGATATCAAGTACCAGTGTGTCGGCAATGCCTGTAAAGCCATG AAGAGCGAGTAA Protein sequence : MKKLLSFTCLAVLGMTSLNVSAAIVLDRTRAVYPGGAKSISLNIKNENQKLPYLAQAWIEDALGQKIVSPFVVLPPVQRV DANQKSIVRIASVPAIETLPKDRESIYYFNLREIPPKSEKSNVMQIAVQSKIKLFYRPEAILPERGAVWQDQVTITKQGT TLKVNNPTPYYVTYVGLAHPKGKEKTSIKGFSAFMVAPKSELDAKIPETLGSEFIISYVNDYGGYMDIKYQCVGNACKAM KSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 6e-52 | 50 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 1e-51 | 50 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 1e-51 | 50 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 1e-51 | 50 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 8e-52 | 50 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 7e-52 | 50 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 1e-45 | 49 |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 2e-54 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fimD | YP_001143437.1 | type I pilus chaperone protein FimD | VFG1547 | Protein | 3e-52 | 50 |
| fimD | YP_001143437.1 | type I pilus chaperone protein FimD | VFG0896 | Protein | 5e-52 | 50 |
| fimD | YP_001143437.1 | type I pilus chaperone protein FimD | VFG0885 | Protein | 6e-46 | 49 |
