Gene Information

Name : dnaB (ASA_3287)
Accession : YP_001143018.1
Strain : Aeromonas salmonicida A449
Genome accession: NC_009348
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 3555334 - 3556734 bp
Length : 1401 bp
Strand : -
Note : -

DNA sequence :
ATGTGTATGGCAGAGCAAGTGACGGCGAAAAAAGACGCCAAGACACAACAGCTGAAAGTTCCTCCCCACTCTTTTGAGGC
CGAACAGTCCGTACTGGGCGGCCTGATGCTGGATAACGAGGCCTGGGATCGGGTTGCCGAACGGGTGATCGACAAGGATT
TCTACAGCCGCCCTCACCGGCTAATCTTCCAGGCCATGACCCGCCTCTCCAACGCGGGCAATCCCATCGATCTCATCACG
CTGCAGGAGGAGCTGGAGCGCTCGGAGCAGCTGGAGGAGTCCGGTGGTTTCGCCTATCTGGTGGAGATCGCCAAGAACAC
CCCGAGTGCCGCCAACATCAATGCCTACGCCGAGATAGTGCGTGAGCGGGCGGTCGTGCGTGAGATGATCTCGGTCGCCA
ACGAGATAGTCGAAGCAGGCTACGAGCCGCAGGGGCGCACCTCGGGCGATCTGCTGGATCTGGCCGAGAGCAAGGTGTTC
CAGATCGCCGAACAGCGTACCAGCGCCAACGAGGGGCCGCAGCCGCTCAAGCTGATCCTCGAGCAGACGGTCGACAAGAT
TGAAGAGCTGTTCAAGACCCCTCACAACGGCGTGACCGGGGTGTCCAGCGGTTATGGGGATCTGGACAAGATGACCGCCG
GTCTGCAGCGCTCGGATCTGATTATCGTGGCGGCCCGTCCCTCCATGGGCAAGACCACCTTTGCCATGAACCTGTGCGAG
CACGCGGCCCTCACCGCCGAGAAACCGGTACTCATCTTCTCGCTGGAGATGCCCTCCGAGCAGATCATCATGCGTATGCT
CGCCTCGGTGGGGCGCATCGACCAGACCAAGGTGCGTACCGGTCAGCTTGACGACGAGGATTGGGCACGCCTCTCCTCCA
CCATGGGATTGCTGCTCGAGAAGGGCAAGATGTATATCGATGACGCCTCCGGCCTCACCCCGACCGATGTGCGCTCCCGC
GCGCGCCGTATTGCCCGTGAGCACGGCGGCCTCTCCATGATCATGATCGACTACCTGCAGCTGATGCGGGTGCCCGCGAT
CTCCGATAACCGGACCCTGGAGATAGGTGAAATCTCCCGCTCCCTCAAGGCGCTGGCAAAAGAGTTGCAGTGCCCGGTGG
TGGCGCTCTCCCAGCTAAACCGAAGCCTGGAACAGCGTGCGGACAAGCGCCCTGTCAACTCGGATCTGCGGGAATCCGGC
TCCATCGAGCAGGATGCGGATTTGATCATGTTTATCTACCGTGATGAGGTGTATCACGATGACAGCCCCGACAAGGGGAT
TGCCGAGATCATCATCGGCAAGCAGCGTAACGGCCCCATAGGCAGTGTGCGCCTTACCTTCCAGGGGCAGTTCTCCCGGT
TCGATAATTACGCCGGTCCGGCGTTTGATGACGACTATTGA

Protein sequence :
MCMAEQVTAKKDAKTQQLKVPPHSFEAEQSVLGGLMLDNEAWDRVAERVIDKDFYSRPHRLIFQAMTRLSNAGNPIDLIT
LQEELERSEQLEESGGFAYLVEIAKNTPSAANINAYAEIVRERAVVREMISVANEIVEAGYEPQGRTSGDLLDLAESKVF
QIAEQRTSANEGPQPLKLILEQTVDKIEELFKTPHNGVTGVSSGYGDLDKMTAGLQRSDLIIVAARPSMGKTTFAMNLCE
HAALTAEKPVLIFSLEMPSEQIIMRMLASVGRIDQTKVRTGQLDDEDWARLSSTMGLLLEKGKMYIDDASGLTPTDVRSR
ARRIAREHGGLSMIMIDYLQLMRVPAISDNRTLEIGEISRSLKALAKELQCPVVALSQLNRSLEQRADKRPVNSDLRESG
SIEQDADLIMFIYRDEVYHDDSPDKGIAEIIIGKQRNGPIGSVRLTFQGQFSRFDNYAGPAFDDDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 5e-98 53
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 2e-99 52
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 8e-100 52
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 5e-99 50
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 8e-89 50
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 8e-89 50
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 9e-98 49
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-87 48
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 8e-81 46