Gene Information

Name : rdgC (ASA_3070)
Accession : YP_001142817.1
Strain : Aeromonas salmonicida A449
Genome accession: NC_009348
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 3306866 - 3307777 bp
Length : 912 bp
Strand : +
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTGGTTTAAAAACCTGCAGATTTATCGCTTTACCCGCCCCTTTGACCTGACAGTGGATCAGCTGGAAACCCAGCTCGA
GGCCTGTGCCTTCACCCCTTGCGGCAGTCAGGACATGTCCCGGTTCGGTTGGGTCAAGCCCCTTGGCAAATTCGGTTCGA
CCCTGACCCACTCCGCCTCAGGCCACATCCTCATCTGTGCCCGCAAGGAAGAGAAGATGCTGCCGGGTACCGTCATCAAG
GAGATGCTGGCGGAGAAGGTAGAAGCGATCGAATTCGAGCAGGGCCGCGCCCTCAAGAAGAAAGAGAAGGAAGCGCTGAA
GGAGGAGATACTACACACCCTGCTGCCCCGCGCCTTCAGCCGCACCAGCCAGACCTTCGCCTGGATCAACCCGGCCGACA
ATCTGATGGTGGTGGATGCAGGCTCCGCCAAGAAGGCGGACGATCTGCTGGCACTGCTGCGCAAAAGCATAGGCACCCTG
CCGGTGGTGCCGGTGGCCCTCAAGAACCCGCCCGAAATCACCATGACAGAGTGGCTGAGCGAGGGTAACCTGCCCGCCAC
CTTCGCACTGGAAGATGAAGCCGAGCTGCGCAGTGCCATGGAGCACGGCGGCATCATCCGCTGCAAGCAGCAGGATCTGA
TGACCGACGAGATAAAGAACCACCTGGCCAACGACAAGCTGGTGACCAAGCTGGCTCTGAACTGGGGCGAGACCCTGAGC
TTCGTGCTGGGGGACGACCTCTCCATCAAGCGTCTCAAGTTCAGCGAAGAGCTGCGCGAGCAGAACGACGACGTGACCAG
CGAAGATCCCGCCGCCCGTCTGGATGCGGACTTCGCCCTGGTGACCGCCGAGCTGGCCCAGTTCATCCCGGCACTGTTTG
CCGCCCTGGGTGGCGAAGAGCAGTCCATCTGA

Protein sequence :
MWFKNLQIYRFTRPFDLTVDQLETQLEACAFTPCGSQDMSRFGWVKPLGKFGSTLTHSASGHILICARKEEKMLPGTVIK
EMLAEKVEAIEFEQGRALKKKEKEALKEEILHTLLPRAFSRTSQTFAWINPADNLMVVDAGSAKKADDLLALLRKSIGTL
PVVPVALKNPPEITMTEWLSEGNLPATFALEDEAELRSAMEHGGIIRCKQQDLMTDEIKNHLANDKLVTKLALNWGETLS
FVLGDDLSIKRLKFSEELREQNDDVTSEDPAARLDADFALVTAELAQFIPALFAALGGEEQSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 5e-64 51