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Name : topB (ASA_0267) Accession : YP_001140206.1 Strain : Aeromonas salmonicida A449 Genome accession: NC_009348 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 283967 - 285937 bp Length : 1971 bp Strand : + Note : decatenates replicating daughter chromosomes DNA sequence : ATGCGACTCTTTATCGCCGAGAAGCCCAGTCTTGGCCGAGCCATTGCCGATGTGTTGCCCAAGCCCCACAAGAAGGGGGA CGGTTTCATCGAAACTGCCGCGGGGGATGTGGTGACCTGGTGCATCGGCCACCTGCTGGAGCAGGCCGAGCCCGATGCCT ACGACGCCGCCTTCAAGCAGTGGCGCATGGAGCAACTGCCCATCATCCCCGCCCAGTGGCAGCTGGTGGCCAAGCCCAAG ACCAAGACCCAGCTCACCGTCATCAAGCGGCTGATCAAGCTGGCCGACTGCGTGGTGAATGCCGGTGACCCGGACAGGGA AGGGCAACTGCTGGTGGACGAGGTGATCGACTTTCTCGGTTACCCCAAGACCAGACCGGTGCAGCGCTGCCTTATCAGCG ATCTCAATCCGCCGGCGGTGCGCCGTGCCCTCGACAAGCTCAGAGACAACAAGGAGTTCGTGCCGCTGGCGGTATCGGCA CTGGCCCGCAGCCGTGCCGACTGGCTCTATGGCATCAACATGACCCGGGCTTACACCCTGCTAGGTCGCAAGGGCGGTTG CAGCGAACTGCTGTCGGTCGGTCGGGTACAGACCCCGCTGTTGGGGCTGGTGGTGCGGCGGGATCTGGAGATAGAGGCCT TCGTACCCAAGCCCTTCTATGAGGTGCTGGCCCATCTGGTGACCGACGGCAACGAGCGCTTCAGCGCCAAGTGGCTGCCC TCCGAGGCCTGCCTGCCCTGGCAGGATGAGGAGGGGCGGGTGCTCAACCGGGCGCTGGCGGAGAAAGTGGTCAGTCGCAT CAATGGCCAACCAGCATCGGTAGAAGAGGTAGAGGAGCAGGCCCGCAAGCAGGCAGCACCGCTGCCCTACAACCTCTCCA GTTTGCAGATCGATGCTGCCAAGCGCTTTGGCATGGATGCCAAGCGAGTGCTGGATGTGTGTCAGGGGCTCTACGAGCGC CACAAGCTCATCACTTATCCCAGATCCGACAGCCGTCACCTGCCCAGCGAACACTTCAATCGGGCTGCCCAGGTACGGGA GGCCATCGCCGCCACTGCGCCGGCACTCGCCAGGGCGGTGAGCGAGGCGGACGGCAAGATCCGTAGCAAGGCGTGGAATG ACAGCAAGGTGGATGCCCACCACGCCATCATCCCCACCGAGAAGCGTGGCAACGAGAGCAGCCTCAGCGGCGATGAGGCC AAAATCTACGGTCTGGTGGCGCGCCAATACCTGCTGCAGTTCTACCCGCCGTTCGAGTACAACGACAGCAAGGTGCTGCT GCGTATCGCGGGTGGCCTGTTCCAGGCCAAGGCGCGGCGGATCCTCAAGGCAGGCTGGAAGGCGCTGCTGGGGGTCGAAG AAGATGACGACGAAGAGAAAGCCGGTACCCTGCCCGCCCTGAAAGAGGGAGAGCAACTGCTGTGCGAGCGCGGTGAGCTG CTGGAGAAGATGACCCAGGCGCCCAAGTCGTTCACCGACGCCACCCTGCTGGCCGCCATGACCGGCATAGCCCGCTACGT GCAGGATCCCGAGATCCGCAAGACCCTGCGCGAAACGGACGGTCTTGGCACCGAGGCGACCCGGGCCGGCATCATAGACC TGCTGTTCAGGCGTCGTTTTCTGGTGCGCCAGGGCAAGAGCATCAAGGGCACGCCCACTGGACGGGCACTGATCCTGGCT CTGCCCACCACCGCCACCACGCCGGACATGACGGCTCTGTGGGAGCAGAGCCTGGGCCAGATTGCCGAGCGGCACGCCAG CTATCAGCAATTTATGGGGCCACTGACAGATCAGTTGAACGCCTTGATTGAGGGAGCCCGGCAGGATTCCGGTGCCAGCT TCAGCGCCCTGCCCAAGGCGGTGCCGGGGGCCGGCAAGCCGCATTTTACCCGTCGCAAGAGCAGTGCAGGCACCACTGGC ACTCCTCGCAAGAGTGCCGGCAAGCGCCCGGCCAAGAGCAAGGCGACCTGA Protein sequence : MRLFIAEKPSLGRAIADVLPKPHKKGDGFIETAAGDVVTWCIGHLLEQAEPDAYDAAFKQWRMEQLPIIPAQWQLVAKPK TKTQLTVIKRLIKLADCVVNAGDPDREGQLLVDEVIDFLGYPKTRPVQRCLISDLNPPAVRRALDKLRDNKEFVPLAVSA LARSRADWLYGINMTRAYTLLGRKGGCSELLSVGRVQTPLLGLVVRRDLEIEAFVPKPFYEVLAHLVTDGNERFSAKWLP SEACLPWQDEEGRVLNRALAEKVVSRINGQPASVEEVEEQARKQAAPLPYNLSSLQIDAAKRFGMDAKRVLDVCQGLYER HKLITYPRSDSRHLPSEHFNRAAQVREAIAATAPALARAVSEADGKIRSKAWNDSKVDAHHAIIPTEKRGNESSLSGDEA KIYGLVARQYLLQFYPPFEYNDSKVLLRIAGGLFQAKARRILKAGWKALLGVEEDDDEEKAGTLPALKEGEQLLCERGEL LEKMTQAPKSFTDATLLAAMTGIARYVQDPEIRKTLRETDGLGTEATRAGIIDLLFRRRFLVRQGKSIKGTPTGRALILA LPTTATTPDMTALWEQSLGQIAERHASYQQFMGPLTDQLNALIEGARQDSGASFSALPKAVPGAGKPHFTRRKSSAGTTG TPRKSAGKRPAKSKAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-109 | 43 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-109 | 43 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 3e-109 | 43 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 2e-103 | 42 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 7e-102 | 42 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 4e-92 | 41 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 1e-103 | 41 |
