Gene Information

Name : argF (ASA_0224)
Accession : YP_001140164.1
Strain : Aeromonas salmonicida A449
Genome accession: NC_009348
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : -
Position : 237741 - 238745 bp
Length : 1005 bp
Strand : +
Note : catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway

DNA sequence :
ATGGCTTTTAATCTGCGTAACCGTAACTTCCTGAAACTGCTGGACTTCACCCCGCGCGAAATCCAATACATGATTGATCT
GGCCATCGACCTGAAAAAAGCCAAATACGGTGGCTATGAGCGCAAACACCTGACCGGCAAGAACATCGCCCTGATCTTCG
AGAAGACTTCCACCCGCACCCGCTGTGCGTTTGAAGTGGCGGCCTTTGACCAGGGCGCTCAGGTCTCCTACCTTGGCCCA
AGCGGCTCCCAAATCGGTCACAAGGAGTCCATGAAGGACACCGCCCGTGTACTGGGGCGCATGTATGACGGCATCGAATA
TCGTGGCTACGGCCAAGAGATCGTGGAAGAGCTGGGCGCTTATGCCGGTGTCCCGGTCTGGAACGGCCTGACCAACGAAT
TCCACCCGACCCAGATCCTGGCCGACTTCATGACCATGCTGGAGCACGGCAAGGGCAAACGTCTGGATCAAATCAAGTTC
GCCTACCTGGGTGATGCCCGCAACAACATGGGCAACTCCCTGATGGTCGGTGCCGCCAAGATGGGTATGGATATTCGCCT
GGTCGCTCCGAAAGCCTTCTGGCCGGAAGAGGATCTGGTTGCCAAGTGCCGCCTGATCGCCGAAGAGACAGGCGCTTGCA
TCACCCTGACCGAAGATGTGAAAGAGGGCGTGCTGGGCACCGACTTCCTCTACACCGACGTCTGGGTATCCATGGGTGAA
GCAAAAGAAGCCTGGGATCAAAGGGTGAAACTGATGACCCCGTATCAGATCAACATGGACGTCATCAACGCCACCAAGAA
CCCGGATGTGAAGTTTATGCACTGCCTGCCGGCGTTCCACAACGATGAGACCACCATGGGCAAGGAAGTGGCTGACAAAT
ATGGGATGAAAGGTCTGGAAGTGACCGAGGACGTGTTCGAATCAGAGCACAGTATCGTGTTTGACGAGGCCGAAAACCGG
ATGCACACCATCAAGGCAGTGATGGTTGCTACGCTGGGCGACTAA

Protein sequence :
MAFNLRNRNFLKLLDFTPREIQYMIDLAIDLKKAKYGGYERKHLTGKNIALIFEKTSTRTRCAFEVAAFDQGAQVSYLGP
SGSQIGHKESMKDTARVLGRMYDGIEYRGYGQEIVEELGAYAGVPVWNGLTNEFHPTQILADFMTMLEHGKGKRLDQIKF
AYLGDARNNMGNSLMVGAAKMGMDIRLVAPKAFWPEEDLVAKCRLIAEETGACITLTEDVKEGVLGTDFLYTDVWVSMGE
AKEAWDQRVKLMTPYQINMDVINATKNPDVKFMHCLPAFHNDETTMGKEVADKYGMKGLEVTEDVFESEHSIVFDEAENR
MHTIKAVMVATLGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 2e-99 60
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-97 60
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-97 60
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-97 60
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-97 60
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 9e-97 60
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 8e-97 60