Gene Information

Name : ASA_2120 (ASA_2120)
Accession : YP_001141933.1
Strain : Aeromonas salmonicida A449
Genome accession: NC_009348
Putative virulence/resistance : Virulence
Product : RadC family DNA repair protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2003
EC number : -
Position : 2257125 - 2257616 bp
Length : 492 bp
Strand : +
Note : -

DNA sequence : 
TTGTGGTCCGGGATTGGCCTGGACCCAAAAAACAGGATTGCCTGTATGTTCACTGAAAGAGAAAAACAGATTATCGCGCT
GGCTCACAGCATTATCGCTCGCCGCTTCACTCGTCTGGATTTGCTGAGCAGCCCCGAGATGGTTGTCGAGTTTCTGACAA
CTCGCTTTGCCACGCATGAGCATGAAACTTTTGCCATGATCCTGCTGGATAATCAGCATCGGGTTATCGACACCGTTGAC
CTTATTCACGGCACTATTGATTCTGCCGCCGTGTATCCGCGTGAAGTGGTCAAAACCGCCCTGAAATATAACGCCGCTGC
TGTGATACTGGCTCACAATCACCCGTCCGGTATCGCCGAACCAAGTCGTGCAGATATCCAAATCACCGAACGGCTGCAGG
CCGCGCTGGATTTCGTTGAGATCCGGGTTCTGGATCATGTCGTGGTCGCCGGTGAATACAGTGTGTCATTTGCAGAACGG
GGATTAATTTAA

Protein sequence : 
MWSGIGLDPKNRIACMFTEREKQIIALAHSIIARRFTRLDLLSSPEMVVEFLTTRFATHEHETFAMILLDNQHRVIDTVD
LIHGTIDSAAVYPREVVKTALKYNAAAVILAHNHPSGIAEPSRADIQITERLQAALDFVEIRVLDHVVVAGEYSVSFAER
GLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 7e-30 56
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 5e-30 53
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 5e-30 53
VC0510 NP_230161.1 DNA repair protein RadC-like protein Not tested VSP-2 Protein 1e-30 52
radC AAN62140.1 putative DNA repair protein RadC Not tested PAGI-2(C) Protein 5e-23 43
radC AAN62275.1 putative DNA repair protein RadC Not tested PAGI-3(SG) Protein 9e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ASA_2120 YP_001141933.1 RadC family DNA repair protein VFG1119 Protein 1e-30 53