Gene Information

Name : kdpB (ASA_0019)
Accession : YP_001139981.1
Strain : Aeromonas salmonicida A449
Genome accession: NC_009348
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase, B subunit
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 19420 - 21477 bp
Length : 2058 bp
Strand : -
Note : -

DNA sequence :
ATGAGCAAGTCCATATCCATCACAACCCATACCGACAAGGTGAAGGGTAAAAAGCAACGCTCGCAAATCGTGCAGGCCAT
GGCCGAAGCGCTTTACCGCTTCAATCCCAAGGCACTGTTTGGCAGCCCTATTCTGTTCACACTCTGGCTGGCTGCCGTCA
TGGCAACCGTGGAGTCCCTGCTGGGGCAGCCTTTGTCTGGGGTCGCCCCCAGTCTGGCCTGGCAACTGACCGCCTGGCTG
TGGCTGACCCTCTGGTTTGCCAACTTCGCCGAGACCCTGGCCGAAGGGCGCGGCAAGGCGAGAGCCGACAGTCTGAAGGC
GGGCATGAGCCAGCTCAAGGCTCGTCGGGTGACCGATGCCAAAGATGGTCAGGGCGAATGGGTGCCTGCCACCAGCCTGC
TGAAAGGCGATCTGGTGCTGGTACGCAGCGGCGAGATGATCCCGGCCGATGGTGAAGTGGTCGCCGGTATCGCCTCGGTC
AACGAAGCCGCCATCACGGGGGAATCTGCCCCCGTCATCCGCGAATCCGGCACCGACCGCAGTGGTGTGACTGGCAACAC
CACAGTGGTCTCCGACGAGATCTGGGTACGCGTCAGCAACAATCCGGGTGAAAGCACGCTGGATCGCATGATAGCCCTGG
TCGAAGGAGCCAAACGTCAGAAGACCCCGAACGAGATGGCGCTCGACGCCCTGCTGGTGGGTCTGACCCTGATCTTCCTG
CTGGTGGTGGCGACCCTGCCCTGGTTCCTCAACTACAACGGCACCCAGGTACCCAGGCTCTATCTGATCGCCCTCTTCAT
CACTCTGATACCGACCACCATAGGCGGTCTGCTCTCCGCCATCGGGATCGCCGGTATGGACCGGCTGGTGAAGCTGAACG
TGATAGCCAAATCAGGCCGCGCCGTGGAGGCCGCCGGTGACGTGCGCACCCTGTTGCTGGACAAGACAGGCACCATCACC
TTCGGTAACCGCATGGCAGACGAGCTGATCCCGGCACCAGGGGTGGATCCCTCCCTGCTGGCCCAGGCGGCCATGCTGGC
CTCCCTTGGCGACAATACGCCGGAGGGCAAGTCCATCCTGACCCTGGCGGGCAAGAGCATGGCCAAGCCGAGCCAGCTGG
AGAGCGACAAGGTGATCCCCTTCAGTGCCGAGACCCGCTTGAGCGGTCTGGATCGCAACGGTCACCAATATCGCAAGGGT
GCTGTGGATGCAGTGCTCAACTACCTCTCTCTCGACCGCAAAGCAGTGCCAGAGGTAATCCTCAAGTCGGTGGATCACAT
AGCTCGCCAGGGCGGCACGCCGTTGCTGGTCTGCACTCACGAGAAGCTGCTGGGGGTCGTGTTCCTCAAGGACATCATCA
AGCCAGGCATCAAGGCCCGCTTCCAGATCCTGCGTCACATGGGGATCCGCACCGTGATGATCACAGGTGACAACCCGCTG
ACCGCCGCCGCCATCGCTGCCGAAGCCGGGGTAGATGACTTTATCGCAGAAGCAACGCCGGAGAAGAAGCTGGCTTATAT
TCGCCAGGAGCAGGCGGACGGACGTCTGGTCGCCATGTGTGGTGACGGTGCCAACGATGCGCCGGCGCTGGCACAGGCTG
ATGTGGGCCTAGCCATGAACGAGGGCACCCAGGCCGCCAAGGAGGCGGGCAACCTGGTGGATCTCGACTCCAACCCCACC
AAGCTGCTGGACGTGGTACTGGTCGGCAAGCAGTTGCTGGTGACCCGGGGAGCATTAACCACCTTCTCCATCGCCAACGA
CGTGGCCAAGTACTTTGCCATACTGCCGGCCCTGTTCATCACCGCCTATCCGCAACTGGGTGCGCTGAACCTGATGCAGC
TGGGTAGCCCCGAAAGCGCCATCTTGTCGGCCATCATCTTCAACGCCCTGATCATTGTGGCGCTGGTACCGCTGGCCCTG
CGCGGTGTCAGTCTGAAGGGAACGGCTGCCAGCCTGCTGCGCCGCAACCTGATGATCTACGGTGTCGGTGGTCTGCTAGT
GCCCTTTATCGGCATCAAGCTGATCGACCTGGTCATCACAGGCCTGGGTCTGGTGTAA

Protein sequence :
MSKSISITTHTDKVKGKKQRSQIVQAMAEALYRFNPKALFGSPILFTLWLAAVMATVESLLGQPLSGVAPSLAWQLTAWL
WLTLWFANFAETLAEGRGKARADSLKAGMSQLKARRVTDAKDGQGEWVPATSLLKGDLVLVRSGEMIPADGEVVAGIASV
NEAAITGESAPVIRESGTDRSGVTGNTTVVSDEIWVRVSNNPGESTLDRMIALVEGAKRQKTPNEMALDALLVGLTLIFL
LVVATLPWFLNYNGTQVPRLYLIALFITLIPTTIGGLLSAIGIAGMDRLVKLNVIAKSGRAVEAAGDVRTLLLDKTGTIT
FGNRMADELIPAPGVDPSLLAQAAMLASLGDNTPEGKSILTLAGKSMAKPSQLESDKVIPFSAETRLSGLDRNGHQYRKG
AVDAVLNYLSLDRKAVPEVILKSVDHIARQGGTPLLVCTHEKLLGVVFLKDIIKPGIKARFQILRHMGIRTVMITGDNPL
TAAAIAAEAGVDDFIAEATPEKKLAYIRQEQADGRLVAMCGDGANDAPALAQADVGLAMNEGTQAAKEAGNLVDLDSNPT
KLLDVVLVGKQLLVTRGALTTFSIANDVAKYFAILPALFITAYPQLGALNLMQLGSPESAILSAIIFNALIIVALVPLAL
RGVSLKGTAASLLRRNLMIYGVGGLLVPFIGIKLIDLVITGLGLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 1e-125 59
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-125 59
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 2e-117 58
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-117 57
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-117 57
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-117 57
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-117 57
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 1e-117 57