Gene Information

Name : join (ASA_1678)
Accession : YP_001141507.1
Strain : Aeromonas salmonicida A449
Genome accession: NC_009348
Putative virulence/resistance : Unknown
Product : IS3 family transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1755757 - 1756919 bp
Length : 1163 bp
Strand : -
Note : -

DNA sequence : 
ATGACAAGATTACGTCGCTCATTTACTGCCGAATTCAAACTCGAAGCCGCATCCCTGGTGCTCGACCAGGGGTATTCTGT
TCCCGAAGCAAGCCGTTCACTGGATGTCGGTGAAACCGTGCTGCGCCGATGGGTTCAGCAACTGCAATCCGAACGCAGTG
GCACAACCCCAATCAGCAAAGCACTGACTCCGGAACAGCAGAAAATTCAGGAGCTGGAAGCCCGTATCAACCGGCTCGAA
CGTGAAAAGGACATACTCAAAAAGGCTACTGCTCTCTTGATGACGGACGAGTTCACACGTACGCGCTGATAGACCGATTA
AGGGAGCAAGCCCCCATCACCCTGGTCTGCTGCGCTTTCGATATTCCCACATCCTGTTTTTACGATTATCTGGCTCGCAG
GAGAGTGATTAACCGTGAGCGAATGCAACAGCGCAGTGAGTTGCACCGCTTGTTCACAGCGAGCCGGGACTCGGCAGGCA
GCCGTGCCTTGATGTCGATGATGCGAGAGCTGGGGTATCAGATTGGCCGATTCAAAGTCCGTAACCTGATGAGGGAAGCC
GGGTTGGCATCCAAACAGCCGGGCACACATCGTTATAAGGTTGCACGGTCTGAACGACCGGATATTCCGAATCTGCTGGC
CCGCGAATTTGATGTTCCGCAACCCAATCAAGTGTGGTGTGGCGATATCACCTACGTCTGGGCAGGTACTCGTTGGCATT
ACCTAGCTGTGGTTCTTGACCTCCATACTCGCCGAGTCGTGGGCTGGGCAATGTCTGACAAGCCTGATGCAGAGCTGGCA
ATCAAAGCACTGGAGATGGCCTATCAGCAGCGGGGTTGCCCATCCGGTGTGCTGTTTCACTCCGACCAGGGTAGCCAATA
TGGCAGCAGGGCATTTCGGCAACGACTGTGGCGCTATCGCATGACCCAGAGCATGAGTCGGCGTGGCAACTGCTGGGATA
ACGCCCCGATGGAGCGGTTGTTCAGAAGCCTGAAGTCAGAGTGGCTCCCGGCAACGGGATACATGAGCCTGCGGGAAGCA
ACGCGGGATATCAGTTATTACCTGATGGATTACTACAACTGGCGGCGTCCACATCAACACAATGACGGGATGCCGCCAGC
AAAAGCCGAGACTCGGCCTAACCAAGTGTCCGGATTTAGTTGA

Protein sequence : 
MTRLRRSFTAEFKLEAASLVLDQGYSVPEASRSLDVGETVLRRWVQQLQSERSGTTPISKALTPEQQKIQELEARINRLE
REKDILKKGYCSLDDGRVHTYALIDRLREQAPITLVCCAFDIPTSCFYDYLARRRVINRERMQQRSELHRLFTASRDSAG
SRALMSMMRELGYQIGRFKVRNLMREAGLASKQPGTHRYKVARSERPDIPNLLAREFDVPQPNQVWCGDITYVWAGTRWH
YLAVVLDLHTRRVVGWAMSDKPDAELAIKALEMAYQQRGCPSGVLFHSDQGSQYGSRAFRQRLWRYRMTQSMSRRGNCWD
NAPMERLFRSLKSEWLPATGYMSLREATRDISYYLMDYYNWRRPHQHNDGMPPAKAETRPNQVSGFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 2e-87 66
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-67 48
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-67 48
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-67 48
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-67 48
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 4e-67 48
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 4e-67 48
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-67 48
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 3e-67 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
join YP_001141507.1 IS3 family transposase VFG1122 Protein 2e-67 48