Gene Information

Name : kdsB (ASA_1554)
Accession : YP_001141390.1
Strain : Aeromonas salmonicida A449
Genome accession: NC_009348
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : -
Position : 1630687 - 1631466 bp
Length : 780 bp
Strand : +
Note : -

DNA sequence :
ATGAGTTTCGTGGTGGTCATTCCTGCCCGCTACGCCTCGACCCGTTTGCCGGGCAAGCCGCTGGCAGATATCCATGGCAA
GCCCATGGTGCAGCACGTGGTGGAAAAAGCCCTGCAATCCGGCGCGGATCGGGTGATCGTCGCCACCGATGACGAGCGGG
TGCACAGCGCCCTGGCGTCTTTTGCCGAACAAGCCGGTGTCGAGGTGTGCATGACATCGCAGGATCACCAGTCCGGCACC
GAGCGACTGGCGGAAGTGTGCCGTCACTACGGCTTCTCTGCCGACACTATCGTGGTCAACGTGCAGGGAGATGAGCCGCT
CATTCCCCCCGCCATCATTCGTCAGGTGGCCGACAACCTGGCTGCGGCGAGCGCGCCCATGGCGACGCTGTCCGTACCCA
TTCAGGACGCTGAAGAGGCGTTCAATCCCAATGCGGTCAAGGTCGTGACGGACAAGGAGGGCTACGCCCTCTACTTCAGT
CGTGCTTGCATTCCCTGGGACAGGGATCGCTTTGCTGCCAGTGATCGCGCTGCTGGGAGCCACGAGCAGATTGGCGATCA
CTACCAGCGCCATATCGGCATCTACGCCTATCGCGCCGGTTTCATCCAGCGTTACGTGGACTGGGCGCCGAGCGTGCTGG
AACAGGTCGAAGCCCTGGAGCAACTGCGGGTGCTCTGGTACGGGGAGAAGATCCACGTGGCCCAGGCGCTGCAAGCGCCA
CCGGTCGGGGTGGATACCCAGGCAGATCTGGACAAGGTACGCGCGCTGCTGGCGAACTGA

Protein sequence :
MSFVVVIPARYASTRLPGKPLADIHGKPMVQHVVEKALQSGADRVIVATDDERVHSALASFAEQAGVEVCMTSQDHQSGT
ERLAEVCRHYGFSADTIVVNVQGDEPLIPPAIIRQVADNLAAASAPMATLSVPIQDAEEAFNPNAVKVVTDKEGYALYFS
RACIPWDRDRFAASDRAAGSHEQIGDHYQRHIGIYAYRAGFIQRYVDWAPSVLEQVEALEQLRVLWYGEKIHVAQALQAP
PVGVDTQADLDKVRALLAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 1e-37 45
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 4e-37 45
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 9e-38 45