Gene Information

Name : rph (cgR_2414)
Accession : YP_001139324.1
Strain : Corynebacterium glutamicum R
Genome accession: NC_009342
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 2656345 - 2657082 bp
Length : 738 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGACTTCTTCTTCCAGCTTTTCTCGTTTTGATGGCCGCGCACAGGATCAGATGCGTGCCGTCAAAATCACCCGTGGATT
TACTTCCAACCCTGCAGGCAGCGTGCTTGTAGAATTCGGCAATACTCGTGTCATGTGCACCGCTTCTGTGGAATTGGGTG
TGCCGCGTTTCAAGCGTGATTCAGGTGAAGGCTGGTTGACCGCAGAGTACGCGATGCTTCCTGCTGCGACTGCGGAGCGT
AACCGTCGTGAATCCATGGCCGGCAAGGTCAAGGGACGCACTCATGAAATTTCTCGTCTGATTGGTCGTTCTTTGCGTGC
AGCTGTGGATCTTTCCCAGCTGGGCGAGAACACCATTGCGATTGACTGCGATGTTCTGCAAGCTGACGGCGGTACTCGTA
CTGCATCGATCACCGGTGCGTATGTGGCGCTGGCTGATGCCATCAAGGTTCTGCAGGAGCGCGGCGTTGTTCCAGGCAGC
CCACTTCTTGCACCAGTTGCTGCTGTTTCCGTTGGCCTGGTCGACGGTAATGTATGCCTTGACCTGCCATATGAAGAAGA
TTCCCGCGCCGATGTTGACCTCAACGTTGTTATGACCGAACACGGTGAATTCGTGGAAATTCAGGGTACCGGCGAAGAAA
CTACCTTCACCCGCGCGCAGCTCAACGACATGCTTGACTATGCCGAAAAGGGCTGCCGCGAATTGGTTGCTGCCCAAAAA
GCTGCACTGGGAATCTAA

Protein sequence :
MTSSSSFSRFDGRAQDQMRAVKITRGFTSNPAGSVLVEFGNTRVMCTASVELGVPRFKRDSGEGWLTAEYAMLPAATAER
NRRESMAGKVKGRTHEISRLIGRSLRAAVDLSQLGENTIAIDCDVLQADGGTRTASITGAYVALADAIKVLQERGVVPGS
PLLAPVAAVSVGLVDGNVCLDLPYEEDSRADVDLNVVMTEHGEFVEIQGTGEETTFTRAQLNDMLDYAEKGCRELVAAQK
AALGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 3e-85 78