Gene Information

Name : cgR_1973 (cgR_1973)
Accession : YP_001138872.1
Strain : Corynebacterium glutamicum R
Genome accession: NC_009342
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 2171338 - 2172771 bp
Length : 1434 bp
Strand : -
Note : catalyzes the formation of phosphoenolpyruvate from pyruvate

DNA sequence :
ATGGGCGTGGATAGACGAACTAAGATTGTATGTACCCTAGGCCCAGCGGTGGCTAGTGCAGATGGAATTCTGCGTTTGGT
AGAAGACGGCATGGATGTTGCTCGCCTCAACTTCTCCCATGGTGACCACCCAGATCATGAGCAAAACTACAAGTGGGTCC
GCGAGGCGGCGGAGAAGACTGGCCGTGCAGTCGGTATTCTCGCAGACCTCCAAGGACCGAAGATCCGTCTTGGCCGTTTC
ACTGACGGCGCAACCGTGTGGGAAAACGGCGAGACCATTCGGATCACCGTTGACGATGTAGAGGGAACGCACGATCGTGT
GTCCACCACCTACAAGAATCTGGCAAAAGACGCGAAGCCAGGCGACCGCCTGCTCGTTGATGACGGCAAGGTTGGCCTCG
TCTGCGTTTCCGTCGAAGGCAACGACGTCATCTGTGAGGTTGTTGAGGGCGGACCAGTCTCCAACAACAAGGGTGTTTCC
CTGCCAGGTATGGATATTTCCGTACCTGCACTGTCCGAAAAGGATATCCGTGACCTGCGCTTCGCCCTGAAGCTCGGCGT
GGACTTTATTGCACTGTCCTTCGTACGTTCCCCAGCAGATGCTGAACTCGTTCACAAGATCATGGACGAAGAAGGTCGTC
GTGTTCCTGTGATCGCCAAGCTGGAAAAGCCAGAGGCTGTCACCTCCCTCGAGCCAATCGTGTTGGCATTCGACGCCGTC
ATGGTTGCTCGTGGTGACCTCGGCGTTGAGGTTCCTCTGGAGGAGGTTCCACTGGTTCAGAAGCGCGCAATCCAGATTGC
CCGTGAGAACGCAAAGCCAGTTATCGTGGCAACCCAGATGCTGGATTCCATGATTGAGAACTCCCGCCCAACCCGTGCGG
AAGCTTCTGACGTGGCAAACGCTGTGCTCGATGGCGCAGATGCTGTCATGCTTTCTGGTGAAACTTCAGTGGGCAAAGAT
CCGCACAACGTTGTGCGCACCATGGCTCGCATTGTTCGCTTCGCTGAAACCGACGGTCGCGTCCCAGACCTGACCCACAT
CCCTCGCACTAAGCGTGGCGTTATTTCCTACTCTGCACGTGATATCGCAGAGCGCCTCAACGCTCGTGCATTGGTTGCGT
TCACCACCTCTGGTGATACCGCAAAGCGTGTGGCTCGTCTGCACAGCCACCTGCCACTGCTCGTGTTCACTCCAAATGAG
GCAGTTCGCTCTGAGCTGGCGCTGACCTGGGGTGCAACCACCTTCCGGTGCCCACCTGTCAGCGATACCGATGACATGAT
GCGCGAAGTCGACCGTGCTCTTTTAGCAATGCCTGAGTACAACAAGGGTGACATGATGGTTGTTGTTGCAGGTTCCCCTC
CTGGTGTTACCGGTAACACCAACATGATTCACGTCCACCTTCTTGGTGACGACACAAGGATTGCAAAGCTCTAA

Protein sequence :
MGVDRRTKIVCTLGPAVASADGILRLVEDGMDVARLNFSHGDHPDHEQNYKWVREAAEKTGRAVGILADLQGPKIRLGRF
TDGATVWENGETIRITVDDVEGTHDRVSTTYKNLAKDAKPGDRLLVDDGKVGLVCVSVEGNDVICEVVEGGPVSNNKGVS
LPGMDISVPALSEKDIRDLRFALKLGVDFIALSFVRSPADAELVHKIMDEEGRRVPVIAKLEKPEAVTSLEPIVLAFDAV
MVARGDLGVEVPLEEVPLVQKRAIQIARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKD
PHNVVRTMARIVRFAETDGRVPDLTHIPRTKRGVISYSARDIAERLNARALVAFTTSGDTAKRVARLHSHLPLLVFTPNE
AVRSELALTWGATTFRCPPVSDTDDMMREVDRALLAMPEYNKGDMMVVVAGSPPGVTGNTNMIHVHLLGDDTRIAKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 8e-68 42
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 7e-68 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 7e-68 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cgR_1973 YP_001138872.1 pyruvate kinase VFG0479 Protein 3e-68 42