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Name : cgR_1381 (cgR_1381) Accession : YP_001138266.1 Strain : Corynebacterium glutamicum R Genome accession: NC_009342 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1513572 - 1515335 bp Length : 1764 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGACGCCTACCCAAAATGAGATCCACCCGAAACACAGCTACTCCCCCATCCGCAAGGACGGTCTCGAGGTCCCGGAGAC CGAAATCCGCCTCGATGACTCGCCAAGCGGCCCCAACGAACCCTTCCGCATCTACCGCACCCGTGGCCCAGAAACCGACC CCAAGCAGGGACTTCCGCGCCTGCGCGAGTCATGGATCACCGCCCGCGGCGACGTTGCCACCTATCAGGGGCGCGAGCGT TTGCTTATCGACGACGGCCGCTCGGCAATGCGTCGAGGTCAAGCTTCGGCAGAGTGGAAAGGCCAAAAACCAGCTCCTTT GAAGGCGCTACCTGGCAAAAGAGTCACCCAAATGGCCTATGCGCGTGCTGGCGTGATTACTCGTGAAATGGAGTTTGTGG CGCTGCGCGAACACGTTGATGCGGAGTTTGTGCGCTCTGAGGTGGCGCGCGGTCGGGCCATTATTCCCAACAACGTCAAC CACCCCGAATCTGAACCGATGATTATTGGTCGCAAATTTTTGACCAAAATCAACGCAAATATTGGCAATTCTGCGGTCAC CTCTTCAATCGAGGAAGAGGTGTCCAAGCTGCAGTGGGCCACGCGCTGGGGTGCCGATACCGTGATGGATCTATCCACCG GCGATGATATTCACACCACCCGCGAATGGATTATCCGCAACTCCCCCGTTCCCATCGGCACCGTACCGATCTACCAAGCG CTGGAAAAAGTAAATGGCGTGGCTGCCGATCTCACCTGGGAAGTATTCCGCGATACCGTCATTGAGCAGTGCGAACAAGG CGTGGACTATATGACCATCCACGCCGGCGTCCTGCTGGCTTATATCCCACTGACTACCCGTCGTGTCACCGGCATTGTCT CCCGCGGCGGATCCATTATGGCCGGTTGGTGTCTGGCGCACCACCGCGAATCATTTCTCTACGAGCATTTCGACGAGCTG TGCAAAATCTTTGCACAATATGACGTCGCATTCTCCCTTGGTGATGGTCTACGCCCCGGCTCGCTTGCCGACGCCAACGA TGCCGCGCAATTCGCCGAGCTGAAAACCATTGGTGAACTCACCCAACGCGCCTGGGAATACGATGTGCAAGTAATGGTCG AAGGACCTGGACACGTGCCACTAAACATGATCCAAGAAAACAACGAGCTGGAACAAAAGTGGGCAGCGGACGCACCTTTT TACACTCTTGGACCACTAGTTACCGACATCGCTCCAGGCTATGACCACATCACTTCTGCCATTGGTGCGGCTCACATCGC CATGGGTGGCACCGCCATGCTGTGTTATGTCACCCCGAAAGAACACCTCGGTCTGCCCAACCGTGACGACGTCAAAACCG GCGTAATCACCTACAAGCTCGCAGCCCACGCAGCCGATGTAGCCAAGGGTCATCCCGGCGCGCGTGCCTGGGACGACGCC ATGAGCAAAGCGCGATTTGAATTCCGTTGGAATGATCAGTTTGCGCTCTCCCTCGACCCCGACACTGCAATCGCTTACCA CGACGAAACCCTGCCGGCAGAGCCTGCCAAAACCGCGCACTTCTGTTCAATGTGTGGCCCTAAGTTCTGCTCCATGCGAA TTAGCCAAGACATCCGCGATATGTTTGGCGATCAAATCGCGGAATTGGGGATGCCTGGGGTTGGGGATTCTTCTAGTGCT GTTGCTTCTAGTGGGGCCCAGGAGGGGATGGCTGAGAAATCCCGGGAGTTTATTGCTGGTGGTGCGGAGGTTTATCGGCG TTAG Protein sequence : MTPTQNEIHPKHSYSPIRKDGLEVPETEIRLDDSPSGPNEPFRIYRTRGPETDPKQGLPRLRESWITARGDVATYQGRER LLIDDGRSAMRRGQASAEWKGQKPAPLKALPGKRVTQMAYARAGVITREMEFVALREHVDAEFVRSEVARGRAIIPNNVN HPESEPMIIGRKFLTKINANIGNSAVTSSIEEEVSKLQWATRWGADTVMDLSTGDDIHTTREWIIRNSPVPIGTVPIYQA LEKVNGVAADLTWEVFRDTVIEQCEQGVDYMTIHAGVLLAYIPLTTRRVTGIVSRGGSIMAGWCLAHHRESFLYEHFDEL CKIFAQYDVAFSLGDGLRPGSLADANDAAQFAELKTIGELTQRAWEYDVQVMVEGPGHVPLNMIQENNELEQKWAADAPF YTLGPLVTDIAPGYDHITSAIGAAHIAMGGTAMLCYVTPKEHLGLPNRDDVKTGVITYKLAAHAADVAKGHPGARAWDDA MSKARFEFRWNDQFALSLDPDTAIAYHDETLPAEPAKTAHFCSMCGPKFCSMRISQDIRDMFGDQIAELGMPGVGDSSSA VASSGAQEGMAEKSREFIAGGAEVYRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 1e-171 | 63 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 1e-171 | 63 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 2e-162 | 58 |
