Gene Information

Name : cgR_0971 (cgR_0971)
Accession : YP_001137848.1
Strain : Corynebacterium glutamicum R
Genome accession: NC_009342
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1080258 - 1080926 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence :
ATGACACACACGCCTCTCCCCCTCGAACTTCAAAACATCTCCCGAACCTTCGGCGAAGGCCCCCGTCTCGTCAGCGCGCT
CAACGACGTCTCCCTCGCCATCCAACCCGGCGAACTCGTCGCCATCATGGGCCCATCCGGCTCAGGCAAATCCACCCTCC
TCAACGTCGCCGGGCTCCTCCAAAAAGCAACAGGCGGACAAGTGCTTATCGACGGCGCAAACGCCTCAGACCTCAACGCC
AAACGCGCGGCCGCAACCAGGCGCCGCCACATCGGCGTCATTTTCCAAAACTACAACCTGGTCCCCACCCTCACCGTCGG
AGAAAATGTCGGCCTGCCTCTAGAACTCGACGGCAAGACCGACCGCCAGGCAGTATCCATCGCACTCGCGGAAGTCGGCC
TCGAAGGCTTCGACGACCGCTTCCCCGAAGAGATCTCCGGTGGCCAAGCCCAGCGCGTCGCCATCGCGAGAGCCCTCATC
GGCCCCCGAAAAATCTTGCTTGCCGACGAACCCACCGGCGCCCTCGACACCTCCACCGGCGACGCAGTCCTCCGCGTCCT
CCGCCAAAGAATCGATTCCGGTGCCGCAGGCCTCCTTGTCACCCACGAGCCCCGCTTCGCCGCGTGGGCAGACCGAACAA
TCATGCTTAGGGACGGTGAAATCCAGTGA

Protein sequence :
MTHTPLPLELQNISRTFGEGPRLVSALNDVSLAIQPGELVAIMGPSGSGKSTLLNVAGLLQKATGGQVLIDGANASDLNA
KRAAATRRRHIGVIFQNYNLVPTLTVGENVGLPLELDGKTDRQAVSIALAEVGLEGFDDRFPEEISGGQAQRVAIARALI
GPRKILLADEPTGALDTSTGDAVLRVLRQRIDSGAAGLLVTHEPRFAAWADRTIMLRDGEIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-37 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-39 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-39 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-39 43
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 6e-25 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cgR_0971 YP_001137848.1 hypothetical protein NC_008702.1.4606598. Protein 4e-36 50
cgR_0971 YP_001137848.1 hypothetical protein CP001581.1.gene598.p Protein 9e-36 44
cgR_0971 YP_001137848.1 hypothetical protein NC_012469.1.7686878. Protein 9e-39 44
cgR_0971 YP_001137848.1 hypothetical protein CP001581.1.gene798.p Protein 9e-35 43
cgR_0971 YP_001137848.1 hypothetical protein NC_012469.1.7685735. Protein 1e-32 42