Gene Information

Name : Mflv_0665 (Mflv_0665)
Accession : YP_001131941.1
Strain : Mycobacterium gilvum PYR-GCK
Genome accession: NC_009338
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 685840 - 686766 bp
Length : 927 bp
Strand : +
Note : PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_1639 integrase, catalytic region

DNA sequence :
GTGGCCGGCCCCGACGGCGGGGCCGGGCTGCGCTGGGGTGTCGAGCCCATGTGTGCCGTGCTCTCCGAGCATGGCATCGC
AATCAGCCCGTCGACCTACTACGAGTGGATCGCCAAGACCCCGACCCGGCGCGAGATCCGCGATGCCGAGTTGGTCGAGA
TCATCACCGCGGCAAGGGAAGGCAAGAGGAAGGGCCGGTTCGTCCAGACGCTCGGGTCACGCAAGTTGTGGATCTGGCTA
CGCGGCCAGGGCCACGACGTCGCCCGCTGCACGGTGGAGCGGATCATGCGCGAGAACGGATGGGAAGGCGCCCGGTACGG
GTCCAAACACAAGACCACCGTCGCCGATAGCAGCCATGTCCGGTATCCGGATCTGGTGGACCGCCGGTTCTACGCGTCGG
CCCCAAATCGGTTGTGGGTGGCTGACTTCACGTATGTGGCGACGTGGATGGGGTTCGTCTACGTGGCGTTCGTCATCGAC
GCCTACAGCCGCCGGATCGTGGGATGGCGAGCCGCTCGGTCGATGACCACCGACCTGGTCCTCGACGCCATCGAGCACGC
GTTCTTCACCCGCACCCAGGACGGCACCAGTCTGCGCGGGCTGATCGCGCATTCGGATGCCGGCAGTCAGTACACCTCGG
TGGCGTTCACCCAACGGCTCATCGACGAGGGAGTGGATCCGTCGGTCGGCTCGGTCGGTGACGCGCTGGACAACGCGCTG
GCCGAGACCACCGTCGGGTCGTTCAAGAACGAGGTGATCCGCCGGCAAGGCCCGTGGCGCGACGTCAACCAGGTCGAGCT
GGCCACCGCCGAGTGGGTGGTGTGGTTCAACACCGAGCGTCCGCATGAGTACCTCGACGACTTCACCCCTGAGGCCGTCG
AGAAGCTCCACTACGATCAAAAACTCACCCCACCAAAGGCAGGGTGA

Protein sequence :
MAGPDGGAGLRWGVEPMCAVLSEHGIAISPSTYYEWIAKTPTRREIRDAELVEIITAAREGKRKGRFVQTLGSRKLWIWL
RGQGHDVARCTVERIMRENGWEGARYGSKHKTTVADSSHVRYPDLVDRRFYASAPNRLWVADFTYVATWMGFVYVAFVID
AYSRRIVGWRAARSMTTDLVLDAIEHAFFTRTQDGTSLRGLIAHSDAGSQYTSVAFTQRLIDEGVDPSVGSVGDALDNAL
AETTVGSFKNEVIRRQGPWRDVNQVELATAEWVVWFNTERPHEYLDDFTPEAVEKLHYDQKLTPPKAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 9e-42 49
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 9e-30 44
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 6e-41 44
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 6e-41 44
Z1198 NP_286733.1 transposase Not tested TAI Protein 2e-42 44
Z1638 NP_287141.1 transposase Not tested TAI Protein 2e-42 44
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 9e-42 44
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 9e-43 44
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 3e-41 44
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 1e-41 44
Z1221 NP_286756.1 transposase Not tested TAI Protein 3e-42 44
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 2e-42 44
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 6e-41 44
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-42 44
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 2e-43 44
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 7e-43 44
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-42 44
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 5e-40 44
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 1e-39 43
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 7e-40 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mflv_0665 YP_001131941.1 integrase catalytic subunit VFG1602 Protein 6e-40 43