|
Name : Mflv_3444 (Mflv_3444) Accession : YP_001134707.1 Strain : Mycobacterium gilvum PYR-GCK Genome accession: NC_009338 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 3662256 - 3664619 bp Length : 2364 bp Strand : - Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: mmc:Mmcs_3402 RNA binding S1 DNA sequence : GTGATCACGTCCGGCGCAGTCAAGTCTGGCCCAGCCAAATCCGACGCAGTGAAATCCGTAACCGCCCGTCTCGCTGAGGA ACTGGCTGTCGCCGAAGCCCAGGTCGCGGCCGCAGTGCGACTGCTCGACGAGGGCGCCACGGTGCCGTTCATCGCCCGCT ACCGCAAAGAGGTCACCGGCAGCCTGGACGACGGTCAGCTCCGGGCACTGGAGGAACGGCTCGGCTATCTGCGCGAGCTC GACGACCGGCGCAACGCGGTGCTCGCCTCGATCAACGAGCAGGGCAAGCTCACCGCCGAGCTCACCGCGGCGCTGATGGC CGCCGACACCAAGGCCAGGGTCGAGGACATCTACCTGCCGTACAAGCCGAAGCGGCGGACCAAGGCGCAGATCGCCCGGG AGGCGGGGCTGCAACCGTTGGCCGAACGCCTGCTGGCCGACCCGTCCGTGGTGCCCGAGGAGGCGGCGGCCGAGTTCACC TCCGCCGAGGTCGCCGACACCGCCGCGGCCCTCGACGGCGCACGGCACATCGTCGTCGAACGGGCCGCCGAAGACGCCGA GCTGGTCGGCGCCCTGCGCGAGCGGTTCTGGGAGAACGCGTCGGCGCGCACCCGGCCGGCGTCCGACGCCGCCGCGGCCT CGGAGAAGGGGCAAAAGTTCCGGGACTACTTCGACCACACCGAACCGCTGTCGTCGATGCCGTCGCACCGGGTGCTCGCC GTGCTGCGCGGTGAGAAGGAGCAGGTGCTGTCCCTGGCGCTCGACGGGGGAGAGGACGACACCTACCGGGCGATGATCGC GTCGGCGCTCGGTGTGGACCTGACCGCCGGAGCCGCCGCCACCCCGTGGCTGGCCGCCACCGTCGGCTTCGCGTGGCGCA CCAGGCTCTCGGTGTCGGCGTCGGTGGACGCGCGGGTGCGGCTGCGGTTGCGGGCCGAGGCCGACGCGGTGACGGTGTTC GCCAGGAACCTCAAGGACCTCCTGCTCGCGGCACCGGCCGGCAACCGGACCACCCTCGGCCTCGACCCGGGGTTCCGCAC CGGCGTCAAGGTGGCCGTCGTCGACGGCACCGGCAAGGTCCTCGACACGTGCGCGATCTACCCGCACCAACCGCAGAAGC AGTGGGACACCGCCAAGGCGACGCTCGCCGCGCTGGTCGCCCGCCACGGGGTCGAGCTGATCGCCGTGGGCAACGGAACC GCGTCGCGCGAGACGGATGCGCTCGCCACCGAACTGATCGCCGACATCCGCGGCGCGGGCGGCACCGCACCGGCCAAGGC GATGGTCAGCGAGGCCGGCGCGTCGGTGTACTCGGCCTCGGCGTACGCCGCCCACGAACTGCCCGACCTGGATGTGACGC TGCGCGGCGCCGTGTCGATCGCCCGCAGGTTGCAGGACCCGCTGGCCGAGCTGGTCAAGATCGAGCCGAAGTCGATCGGT GTCGGCCAGTACCAGCACGACGTCACCCCCGGCATCCTGGCGAAGAGCCTGGGCGCCGTCGTCGAGGACGCGGTCAACGC CGTCGGCGTCGACCTGAACACCGCGTCGGTGCCGCTGCTGTCGCGTGTCTCGGGCATCACCGAATCGCTGGCCGAGGCGA TCGTCGCGCACCGCGACCAGACGGGCCGTTTCCAGAACCGGCGCGCGCTGCTCGACGTTCCGCGGCTGGGCCCCAAGGCA TTCGAGCAGTGCGCGGGATTCCTGCGCATCCGCGACGGCGACGACCCGCTCGATGCGTCCGGCGTCCACCCGGAGTCCTA TCCGGTGGTCCGGCGCATCCTGGACCGCGCCAACGTGACGTTGACCGAGATCATCGGCGACGAGCGCGCACTGCGGGCAC TCAAGCCCGCCGACTTCGCCGACGACACGTTCGGCATCCCGACCGTCACCGACATCCTCGGCGAACTGGAGAAGCCGGGC CGCGACCCCCGGCCTGCGTTCACCACCGCGACGTTCGCGGCGGGCGTCGAGAAGGTGGCCGACCTCAAGGCCGGGATGAT CCTCGAGGGTGTGGTCACCAACGTCGCCGCGTTCGGCGCGTTCGTCGACGTCGGGGTGCACCAGGACGGGCTCGTGCACG TCTCCGCGATGGCCGACCGCTACGTCTCCGATCCGCACGAGGTGGTGCGCTCGGGTCAGGTGGTCCGGGTGAAGGTCGTC GACGTCGACGTGGAACGTCAGCGCATCGGTCTGAGCATGCGGCTCAACGACGAGACCACGCCGCAGCGCGGCCCGCGCCG CAACGAACGGCCCCGCACACCGCAGCGAAAGCCGCAGCGCCCCAACAACACCGGCGGCCGGGAGACCGGCAAGGCGGGCG GTTCCATGGCGCGGGCGCTACGGGACGCCGGCTTCGGACGATGA Protein sequence : MITSGAVKSGPAKSDAVKSVTARLAEELAVAEAQVAAAVRLLDEGATVPFIARYRKEVTGSLDDGQLRALEERLGYLREL DDRRNAVLASINEQGKLTAELTAALMAADTKARVEDIYLPYKPKRRTKAQIAREAGLQPLAERLLADPSVVPEEAAAEFT SAEVADTAAALDGARHIVVERAAEDAELVGALRERFWENASARTRPASDAAAASEKGQKFRDYFDHTEPLSSMPSHRVLA VLRGEKEQVLSLALDGGEDDTYRAMIASALGVDLTAGAAATPWLAATVGFAWRTRLSVSASVDARVRLRLRAEADAVTVF ARNLKDLLLAAPAGNRTTLGLDPGFRTGVKVAVVDGTGKVLDTCAIYPHQPQKQWDTAKATLAALVARHGVELIAVGNGT ASRETDALATELIADIRGAGGTAPAKAMVSEAGASVYSASAYAAHELPDLDVTLRGAVSIARRLQDPLAELVKIEPKSIG VGQYQHDVTPGILAKSLGAVVEDAVNAVGVDLNTASVPLLSRVSGITESLAEAIVAHRDQTGRFQNRRALLDVPRLGPKA FEQCAGFLRIRDGDDPLDASGVHPESYPVVRRILDRANVTLTEIIGDERALRALKPADFADDTFGIPTVTDILGELEKPG RDPRPAFTTATFAAGVEKVADLKAGMILEGVVTNVAAFGAFVDVGVHQDGLVHVSAMADRYVSDPHEVVRSGQVVRVKVV DVDVERQRIGLSMRLNDETTPQRGPRRNERPRTPQRKPQRPNNTGGRETGKAGGSMARALRDAGFGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 5e-167 | 60 |
