Gene Information

Name : Mflv_3188 (Mflv_3188)
Accession : YP_001134453.1
Strain : Mycobacterium gilvum PYR-GCK
Genome accession: NC_009338
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3373354 - 3374391 bp
Length : 1038 bp
Strand : -
Note : PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_2595 integrase, catalytic region

DNA sequence :
GTGCCGGCATCTGGAGATCACCGAGTCGACGTGGCACCGCTGGATTGCCCAGTACGGCGGCATGAAAGCCAACGAGGCCA
AACGGCTCAAGGAACTCGAAGCCGAGAACGCCCGGCTCAAGAAGCTGGTCGCCAACCAGGCCCTCGACATCGACATGCTC
AAGGAGATTTCGGCGGGAAACTTCTAACCCCGAACCGCAAGCGCAGCGCGGTCATAGCGCTGCGTGAGCGGTTCGGGGTC
TCTGAGCGCCGGGCCTGCACCGTCGTCGGTCTGCACCGTTCCACGATGCGGCTGACACCGGCACCGGTCACCACCGAGGA
GGCCGAGCTTCGTGCCTGGCTGCGCCGGTTTTCCACCGACCGCCCGCGGTGGGGGTGGCGCCGGGCCGCCAAGATGGCGC
GCCGTGCCGGCTGGAAGGCCAACAACAAGCGCATCCGCCGACTGTGGCGCGAGGAGGGCCTGCGGGTGCCTCAGCGGCGC
CGCAAGAAGCGGCTGACCGGCATCGGTGTCGCCGTGGGTGCGATGTCCCCGATCCGCCCGAACGTGATCTGGGCGATGGA
CTTCCAGTTCGACACCACCGCCGATGGCCGCACGCTGAAGATGCTCAACGTCATCGACGAGTTCACTCGCGAAGCACTCG
CGATCGAGGTCGACCGCGCCATCAACGCCGACGGCGTCGTCGACGTGCTGGATCGCCTGGCCCTCACCTACGGGGCGCCA
CACTATGTGCGCTTCGACAACGGTCCCGAGTTCGTCGCGAACGCCGTGGCCGATTGGTGCCGATTCAACAGTGCCGGTTC
ACTTTTCATAGATCCGGGCTCGCCATGGCAAAACGCCTGGATCGAATCATTCAACGGCAGGCTCCGTGATGAACTGCTCA
ACCTGTGGCGCTTCGACTCCCTGCTGGAGGCCCGCGTGATCATCGAGGACTGGCGCCGCGACTACAACGCCAACCGACCC
CACTCCGCCCACGGCGAACTCACCCCAGCCGAGTTCGCTCTACAGTGGACCACGACCCATCAACCCCAAGTCGCATAA

Protein sequence :
MPASGDHRVDVAPLDCPVRRHESQRGQTAQGTRSRERPAQEAGRQPGPRHRHAQGDFGGKLLTPNRKRSAVIALRERFGV
SERRACTVVGLHRSTMRLTPAPVTTEEAELRAWLRRFSTDRPRWGWRRAAKMARRAGWKANNKRIRRLWREEGLRVPQRR
RKKRLTGIGVAVGAMSPIRPNVIWAMDFQFDTTADGRTLKMLNVIDEFTREALAIEVDRAINADGVVDVLDRLALTYGAP
HYVRFDNGPEFVANAVADWCRFNSAGSLFIDPGSPWQNAWIESFNGRLRDELLNLWRFDSLLEARVIIEDWRRDYNANRP
HSAHGELTPAEFALQWTTTHQPQVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 4e-46 47