Gene Information

Name : Mflv_3168 (Mflv_3168)
Accession : YP_001134433.1
Strain : Mycobacterium gilvum PYR-GCK
Genome accession: NC_009338
Putative virulence/resistance : Virulence
Product : periplasmic solute binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 3348777 - 3349718 bp
Length : 942 bp
Strand : -
Note : PFAM: periplasmic solute binding protein; KEGG: rha:RHA1_ro07271 ABC metal ion transporter, substrate-binding protein

DNA sequence : 
GTGGGAGCACGGCACGCAAGCCGACGTGCGCGAGGCCGGCCGGCCACGTGGGTGGCGATCGCCTGCTGCGCGTCGATGGT
GGCGTGTTCCTCACCGATCGACACCGGCGATGCCGCACGGCCCACGGTGCTGACGACGTTCACCGTGCTGGCCGACATCG
CCGCCAACGTGGCCGGTGACCATCTGACCGTGGAGTCGATCACCAAGCCGGGCGCGGAGATTCACGGCTACGAGCCCACT
CCCGGTGATATCAGGAAAGCGGCGAGGGCCGATCTGATCCTCGACAACGGGCTGAACCTGGAAGCCTGGTTCGCCCGGTT
CGTCGACGGCATCGACGTCCCGCACGTCGTTGTCAGCGACGGTGTCGCCCCGCTCGAGATCGCCGAAGACGCGTACACCG
GGATGGCGAATCCGCACGCCTGGATGTCCCCGCTCAACGTCCAGATATACGCCGACAACATGGCCGACGCATTCGCCGAC
CTCGACCCCGACCACGCCCAGGCCTATCGCGACAACGCCGCCGCCTACCGCACCCAGCTCCAGGAAGTCCATGACGAGCT
CGTCGAGCGACTCGACGCGCTGCCGCCCACCCAACGCGCGCTGGTGACCTGCGAGGGAGCCTTCTCCTATCTGGCCCGCG
ATGCCGGTCTGACCGAGAAGTACATCTGGGCGGTCAACGCCGAGCAGCAGGCGACCCCTCAACAGATCGCCTCGACCATC
GAGTTCGTCGACGCCAACGACGTCCCCGCGGTGTTCTGTGAGTCCACCGTCTCCGACGCACCGATGCAGCGCGTCGTGGA
AGCCACCGGAACACGTTTCGGCGGAGTGCTTTTCGTCGACTCCCTCTCGGAGGCCGACGGGCCGGTTCCCACCTATCTCG
ACCTGATCCGCCACGACGCCACCACCATCGCGGCGGCCTTGACCGCCGACCGCGCGTCGTGA

Protein sequence : 
MGARHASRRARGRPATWVAIACCASMVACSSPIDTGDAARPTVLTTFTVLADIAANVAGDHLTVESITKPGAEIHGYEPT
PGDIRKAARADLILDNGLNLEAWFARFVDGIDVPHVVVSDGVAPLEIAEDAYTGMANPHAWMSPLNVQIYADNMADAFAD
LDPDHAQAYRDNAAAYRTQLQEVHDELVERLDALPPTQRALVTCEGAFSYLARDAGLTEKYIWAVNAEQQATPQQIASTI
EFVDANDVPAVFCESTVSDAPMQRVVEATGTRFGGVLFVDSLSEADGPVPTYLDLIRHDATTIAAALTADRAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-71 58
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 5e-71 58
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 5e-71 58
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 5e-71 58
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 4e-71 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mflv_3168 YP_001134433.1 periplasmic solute binding protein BAC0349 Protein 2e-71 58
Mflv_3168 YP_001134433.1 periplasmic solute binding protein BAC0439 Protein 9e-68 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mflv_3168 YP_001134433.1 periplasmic solute binding protein VFG0525 Protein 2e-71 58