Gene Information

Name : Mflv_3166 (Mflv_3166)
Accession : YP_001134431.1
Strain : Mycobacterium gilvum PYR-GCK
Genome accession: NC_009338
Putative virulence/resistance : Virulence
Product : ABC-3 protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 3347090 - 3348034 bp
Length : 945 bp
Strand : -
Note : PFAM: ABC-3 protein; KEGG: rha:RHA1_ro07269 possible ABC Mn(2+)/Zn(2+) transporter, permease component

DNA sequence : 
ATGACCGTCGTCGAGTTCCTCGTCGAACCGCTGCAGCTGGAGTTCATGGTCCGCGCCACCGTCACGACGCTCATCGCGTC
GACTGTGTGCGCCACGCTGTCGTGCTGGCTCGTTCTCATCGGCTGGTCGTTGATGGGAGACGCGGTATCACACGCCGTCC
TTCCCGGCGTCGTGCTGGCCCACATCGTCGGTGCACCGTTTGCGTTGGGCGCCATCATTTTCGGCTTCGTCGCGGTCGGA
CTCATCGGCGTCGTCCGAGACACCAGCCGCACCAAGGAAGACGCCGCCATCGGGGTCGTCTTCACGACCCTGTTCGCGCT
CGGACTGGTGCTGATCTCGGTGACGCCCAGTCAGGTCGATCTCAACCACATCATCTTCGGCAACGTGCTCGGTGTCTCCC
GGGCCGACCTCATCCAGGTGGCCGTCCTCGGCACCGTCGTGATGGCGGTCCTGGTCTACAAACGTCGCGACTTCACCCTC
TACGCCTTCGATCCCCACCACGCCCACGCGATCGGACTCAATCCCCGCCTGCTGGGCGCCGCCCTGCTCGGATTGCTCGC
TCTGACCGCGGTCGTGGCGCTGCAGGCCGTGGGAGTCGTTCTCGTGGTCGCCCTGCTCATCACTCCCGGTGCGACCGCCT
ACCTGATCACAGAGCGGTTCAGCCGCATGCTGCTCATCGCACCGACGATCGCCGCGGTCTGCGCACTGACCGGCCTGTAC
GCGAGCTACTACCTCGACACCGCGTCCGGGCCGATGGTCGTGCTGGCCAACGGCACAGCGTTCGCGCTCGCCTACCTCGC
TCGTCTCGGCCGGGAACAGCGCACCCGGCACCACCGCCCCGGCGTCAGAGCACCTTGGACAGAAACTCCTGCAGCCGAGG
ATGCTTCGGATTGTCGAAGATCTCGGCGGGCGGGCCTTCCTCGACGATGTGGCCGTCGGCCATGA

Protein sequence : 
MTVVEFLVEPLQLEFMVRATVTTLIASTVCATLSCWLVLIGWSLMGDAVSHAVLPGVVLAHIVGAPFALGAIIFGFVAVG
LIGVVRDTSRTKEDAAIGVVFTTLFALGLVLISVTPSQVDLNHIIFGNVLGVSRADLIQVAVLGTVVMAVLVYKRRDFTL
YAFDPHHAHAIGLNPRLLGAALLGLLALTAVVALQAVGVVLVVALLITPGATAYLITERFSRMLLIAPTIAAVCALTGLY
ASYYLDTASGPMVVLANGTAFALAYLARLGREQRTRHHRPGVRAPWTETPAAEDASDCRRSRRAGLPRRCGRRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-40 46
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-40 46
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-40 46
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-40 46
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-40 46
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 2e-38 41
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-38 41
sitC NP_461784.1 permease Virulence SPI-1 Protein 3e-38 41
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-38 41
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mflv_3166 YP_001134431.1 ABC-3 protein BAC0352 Protein 1e-40 46
Mflv_3166 YP_001134431.1 ABC-3 protein BAC0442 Protein 3e-41 44
Mflv_3166 YP_001134431.1 ABC-3 protein BAC0441 Protein 4e-35 42
Mflv_3166 YP_001134431.1 ABC-3 protein BAC0351 Protein 1e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mflv_3166 YP_001134431.1 ABC-3 protein VFG0528 Protein 1e-40 46
Mflv_3166 YP_001134431.1 ABC-3 protein VFG0527 Protein 1e-38 41