Gene Information

Name : Cvib_0685 (Cvib_0685)
Accession : YP_001130202.1
Strain : Chlorobium phaeovibrioides DSM 265
Genome accession: NC_009337
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 784175 - 785497 bp
Length : 1323 bp
Strand : -
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: cte:CT0227 UDP-glucose/GDP-mannose dehydrogenase family protein

DNA sequence :
ATGACCAACATCAACGCACAGAAATCCCCGAAAATTGCCGTCATCGGGCTCGGCTATGTTGGCCTGCCCCTCGCCGTCGA
GTTCGCAAAGCACTACCCTGTAGCCGGGTTCGACATCAAGCAGCCACGAATTGACGAACTCAACAGCTGCAAAGACTCCA
CACTCGAAACAGAGGAACAGGAGCTCAAAATGTGCATAACGAGAGAGAATCCCCTCCCGAAATCGGGCGCCAAAGGGCTC
TTCGTCACCACGAATCTGCAGGATCTTGCCGACGCCAATGTTTACATAGTCACGGTCCCAACCCCAACCGACAAGAACAA
CCGCCCCGACCTCACCCCGCTTGTCAAAGCCAGTGAAACCGTCGGCAAAGTGCTCAAGCAGGGCGACATCGTCATCTATG
AATCCACCGTCTACCCCGGAGCCACCGAAGAGGACTGTGTGCCTGTGCTTGAAAAAATCTCCGGCATGACAATGAACGAG
GGATTCTTCGTCGGCTACTCACCCGAGCGCATCAACCCCGGTGACAAACTGCACACCGTCACAAAAATCAAGAAAGTGAC
CTCCGGCTCCACCCCTGAAGCTGCAGCCGTTGTCAACGGGCTCTACCTCTCCATTATAGAGGCCGGCACCCACCTCGCCC
CCTCCATCAAAGTTGCCGAAGCCGCCAAGGTCATTGAGAACTCGCAGCGCGACATCAACATCGCCTTCGTCAACGAACTC
GCCCGCATCTTCAACCGTATGGAAATCGACACGCTCGATGTCCTTGAAGCTGCTTCCACCAAATGGAACTTCCTCCCCTT
CAAACCCGGTCTGGTAGGAGGCCACTGCATCGGCGTCGACCCATACTACCTTGCCCAGAAAGCGCAGGAGGTCGGTTACA
ACCCCGAAATCATCCTCGCCGGACGCCGCCTCAACGACAACATGGGCGCCTATGTAGCCAGCGAAGCCGTCAAACTCCTG
ATCAGGAACGACTGCCATGTCAAGAACGCCAAAGTGCTCGTACTCGGCATCACCTTCAAGGAAAACTGCCCCGACATCCG
CAACAGCCGCGTCATCGACATCATCAAAGAACTGCAGGAATACGGCTGCAATGTCGAGGTCGCCGACCCCTGGGCCTCGC
CTGAAGAGGTCATGCACGAGTACGGTCTGCCAATGATCCACAGTACCAACGGTATAGAAAAAAACAACTACCAGGCAGTT
GTAGCGGCAGTAGGCCACAACGAATTCAAAGCGCTCGACCCGAGAGCCTGGCTCACAAAAAACGGCATTGTGTATGATGT
GAAAGGCATCTACGATCGCAAAATTTCGGATGGACGGCTCTAA

Protein sequence :
MTNINAQKSPKIAVIGLGYVGLPLAVEFAKHYPVAGFDIKQPRIDELNSCKDSTLETEEQELKMCITRENPLPKSGAKGL
FVTTNLQDLADANVYIVTVPTPTDKNNRPDLTPLVKASETVGKVLKQGDIVIYESTVYPGATEEDCVPVLEKISGMTMNE
GFFVGYSPERINPGDKLHTVTKIKKVTSGSTPEAAAVVNGLYLSIIEAGTHLAPSIKVAEAAKVIENSQRDINIAFVNEL
ARIFNRMEIDTLDVLEAASTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEVGYNPEIILAGRRLNDNMGAYVASEAVKLL
IRNDCHVKNAKVLVLGITFKENCPDIRNSRVIDIIKELQEYGCNVEVADPWASPEEVMHEYGLPMIHSTNGIEKNNYQAV
VAAVGHNEFKALDPRAWLTKNGIVYDVKGIYDRKISDGRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-115 57
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-115 57
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-102 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cvib_0685 YP_001130202.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 1e-115 57