Gene Information

Name : Cvib_1517 (Cvib_1517)
Accession : YP_001131030.1
Strain : Chlorobium phaeovibrioides DSM 265
Genome accession: NC_009337
Putative virulence/resistance : Unknown
Product : glutamate racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0796
EC number : 5.1.1.3
Position : 1689774 - 1690589 bp
Length : 816 bp
Strand : +
Note : converts L-glutamate to D-glutamate, a component of peptidoglycan

DNA sequence :
ATGCACCGAACCCCGACTTCACAGAGCCCCATCGGCATCTTCGACTCCGGAGTCGGAGGACTGACGGTTTTAAAAGCCAT
GCAGAAGCTGCTGCCCTCCGAACAGCTTCTCTACTTCGGCGACACCGCAAGGGTACCATACGGCACGAAATCACAGGTAA
CAATCCGTCGCTACGCCGAGGAAGACACCCGTATTCTTCTTCGCCACCAGCCAAAAATGATTATCGTCGCCTGTAACACC
GTCTCGGCCCTCGCCCTGGATGTGGTGGAAAAAACCGCCGACCCGCTGCCCGTTCTTGGCGTTCTTGAAGCCGGAGCCGA
CACGGCGGTTGAGGTAACACGAACAGGACGCATCGGCGTCATTGGAACTCAGGCAACAATATCGTCCAACGCTTACGCTT
ACGCAATCAACCAGGCCAGTGCCGATAGTGAAGTTTTCTCAACAGCCTGCCCGCTTTTTGTCCCGCTTGCCGAAGAGGGT
ATGCTCAACAACGAAGCCACAAGGCTGATTGCACGCGAATACCTCGCCCCCCTTCTTGCCGAAGAAATAGACACCCTCGT
CCTCGGATGCACCCACTACCCCATTCTCCGCACTATCATTGAAGAAACAGCTGGAACCGGAGTAACAATCATCGACTCGG
CAGAGGCAGTTGCCGCCAGAGCCGCGGCCCTTCTCCGGAATACCGGAATGGAAGCTTCCGGCACCCGAGCAACCATCCCC
CACCTTATGGTGAGCGACCTTCCCCAGAAATTCAGCAGCCTCTACCGCCTCTTCATGAACGCCACCGTCCCCGATGTAGA
ACTGGTAGAAGTCTAA

Protein sequence :
MHRTPTSQSPIGIFDSGVGGLTVLKAMQKLLPSEQLLYFGDTARVPYGTKSQVTIRRYAEEDTRILLRHQPKMIIVACNT
VSALALDVVEKTADPLPVLGVLEAGADTAVEVTRTGRIGVIGTQATISSNAYAYAINQASADSEVFSTACPLFVPLAEEG
MLNNEATRLIAREYLAPLLAEEIDTLVLGCTHYPILRTIIEETAGTGVTIIDSAEAVAARAAALLRNTGMEASGTRATIP
HLMVSDLPQKFSSLYRLFMNATVPDVELVEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0549 NP_207344.1 glutamate racemase Not tested cag PAI Protein 3e-29 45
glr AAR03971.1 glutamate racemase Not tested cag PAI Protein 3e-28 44
glr AAC44708.1 Glr Not tested cag PAI Protein 1e-28 44
glr AAR03882.1 glutamate racemase Not tested cag PAI Protein 4e-29 44
glr AAR03940.1 glutamate racemase Not tested cag PAI Protein 3e-29 44
HP0549 BAD13991.1 - Not tested cag PAI Protein 1e-29 44
glr AAR03910.1 glutamate racemase Not tested cag PAI Protein 6e-28 43
murI NP_223214.1 glutamate racemase Not tested cag PAI Protein 1e-27 42