|
Name : Cvib_0153 (Cvib_0153) Accession : YP_001129678.1 Strain : Chlorobium phaeovibrioides DSM 265 Genome accession: NC_009337 Putative virulence/resistance : Virulence Product : RNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : 2.7.7.49 Position : 170131 - 171372 bp Length : 1242 bp Strand : + Note : PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; KEGG: mac:MA4626 reverse transcriptase DNA sequence : ATGACCAAGTCTTTCGAAATATCCAAGAAACTTGTATGGGAGGCCTATCAATGTGTCAAGGCAAATGAGGGGGCTGCCGG GGTAGATCATGAAACGATAGAGCAATTCGATCGTCATCTGAAAGACAATCTGTACAAGATCTGGAATCGTATGTCATCCG GCAGCTATTTTCCGCCGCCGGTGAAAGGCGTGCCGATACCAAAGAAATCAGGTGGCGAAAGAATGTTGGGGATTCCTACG GTATCAGATCGAATTGCCCAGACGGTGGTCAAGCTAAAGCTTGAGCCGATTCTTGAGCCGCTGTTTCATCAAAATTCATA TGGCTACCGACCTGGGCGTTCAGCTCTGGATGCTGTGGCTATGGTGAGACGGCGGAGCTGGGAATACGACTGGGTTGTGG AATTTGATATCAAGGGACTCTTTGACAATATCGACCATGACTTGCTGATGCGTGCGCTCAGGAAACATTGCGAAACACCG TGGATTCTGCTCTATGTTGAACGGTGGCTTAAGGCCCCGATGCAGACAGCAGTAGGTGCCATAGTGGAGCGGACAAGCGG CACGCCGCAAGGCGGCGTCGTGAGCCCACTACTTGCGAATCTCTTCCTCCATTATGCTTTCGATATGTGGGTAACCCAGA ATCTGCGAAGCGTGCGATTTTGCCGATACGCAGATGATGGAGTGATTCACTGTAAAAGTCGGGAGCAGGCGGAGTTTGCA CTTCGTAAGATTCGCAAGCGGTTTGAGCAGTGCAGACTTGAACTGCACCCTGACAAAACGCGTATCGCCTATTGTCAGGA TGTCAATCGGCAAGAAGCATACCCGAATGTGCAGTTTACCTTTCTCGGCTATACCTTCAGACCGCGAAGATCGGTTGACA AGTATGGTCGGCTTTATGTGAACTTCAGCCCGGCGGTAAGCCGTGACGCCCTTAAGGCTATGCGGCAAACCATAAGGGGT TGGCATATCCAGCTACGGTGTGATCGGAATCTCCAGGATTTAGCTGCGAGGTTTAATGCGGTACTCCGCGGCTGGAACGG CTACTATGGTAAATTCTATGGGTCGGCAATGTCAGTCATATGGCGTCACATGAATATGTATTTGATGCGTTGGTTGATGC GAAAGTACAAGCATTTAGCTGGGCATAAGACCCGAGCAAGAAAAGCTCTGGGTAAACTGGCTCAAAGCTTTCCGAACGAA TTCGTTCACTGGCAACTTGGATATGCACCAAAGGCTGGATGA Protein sequence : MTKSFEISKKLVWEAYQCVKANEGAAGVDHETIEQFDRHLKDNLYKIWNRMSSGSYFPPPVKGVPIPKKSGGERMLGIPT VSDRIAQTVVKLKLEPILEPLFHQNSYGYRPGRSALDAVAMVRRRSWEYDWVVEFDIKGLFDNIDHDLLMRALRKHCETP WILLYVERWLKAPMQTAVGAIVERTSGTPQGGVVSPLLANLFLHYAFDMWVTQNLRSVRFCRYADDGVIHCKSREQAEFA LRKIRKRFEQCRLELHPDKTRIAYCQDVNRQEAYPNVQFTFLGYTFRPRRSVDKYGRLYVNFSPAVSRDALKAMRQTIRG WHIQLRCDRNLQDLAARFNAVLRGWNGYYGKFYGSAMSVIWRHMNMYLMRWLMRKYKHLAGHKTRARKALGKLAQSFPNE FVHWQLGYAPKAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 6e-110 | 56 |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 6e-83 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cvib_0153 | YP_001129678.1 | RNA-directed DNA polymerase | VFG1512 | Protein | 4e-83 | 47 |
