Gene Information

Name : Cvib_1485 (Cvib_1485)
Accession : YP_001130998.1
Strain : Chlorobium phaeovibrioides DSM 265
Genome accession: NC_009337
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1657371 - 1658084 bp
Length : 714 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: plt:Plut_1701 ATPase

DNA sequence : 
ATGGCTGAAGAAATTCTCCGCCTTGATCATATCCGCAAGGAACTTGAGTTGTCGCGCGATGTGCGACAGACCATCATTCC
GAACCTTTCTCTTGAAATCAACGCAGGTGAGTTTGTCTCCATTACCGGGCCGTCGGGTTCGGGCAAGTCAACGCTCCTCT
ATATCATGGGCGGGCTTGACAAACCTACCTCCGGTCGGGTGTGGCTTTCGGGTGAGGATATCACTGAAAAGAACGAGACT
GAGATGACCCGCATCCGCAACAGTAATATCGGGTTCATCTACCAGTTCCATTTTCTTCTTCCGGAGTTCAATGCCCTTGA
AAATGTGAGCATGCCGATGATGATCAGCGGAGGGTTCTCACGAAAGGAAATCAGGGAGCGGGCTATGGAACTGCTTGCCA
TGGTGGAGCTTACCGAGAAGCACGCCAACCGGCCGAGCCAGCTTTCAGGCGGTCAGCAGCAGCGGGTTGCCATTGCCCGG
GCGCTTGCCAACAATCCGAAAGTGCTGCTTGGCGACGAGCCGACCGGCAACCTCGACTCTCGTTCGGCCGACAATGTCTA
CCAGCTTTTTGACCGGTTGAACCGAGAGCTCTCGCAGACGGTTGTTGTTGTGACCCATGATGAGGATTTTGCCAACAGGG
CGGGACGCAGGATCCATCTGGTTGATGGAAAAATAGAGAGTGACAGGACGCTTTCGGGACGCAGAACATTTTGA

Protein sequence : 
MAEEILRLDHIRKELELSRDVRQTIIPNLSLEINAGEFVSITGPSGSGKSTLLYIMGGLDKPTSGRVWLSGEDITEKNET
EMTRIRNSNIGFIYQFHFLLPEFNALENVSMPMMISGGFSRKEIRERAMELLAMVELTEKHANRPSQLSGGQQQRVAIAR
ALANNPKVLLGDEPTGNLDSRSADNVYQLFDRLNRELSQTVVVVTHDEDFANRAGRRIHLVDGKIESDRTLSGRRTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cvib_1485 YP_001130998.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-41 49
Cvib_1485 YP_001130998.1 ABC transporter-like protein CP001581.1.gene598.p Protein 8e-36 46
Cvib_1485 YP_001130998.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-32 46
Cvib_1485 YP_001130998.1 ABC transporter-like protein CP001581.1.gene798.p Protein 7e-34 46