Gene Information

Name : Cvib_1358 (Cvib_1358)
Accession : YP_001130871.1
Strain : Chlorobium phaeovibrioides DSM 265
Genome accession: NC_009337
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 1516021 - 1517166 bp
Length : 1146 bp
Strand : +
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; KEGG: plt:Plut_1563 cystathionine gamma-synthase

DNA sequence :
ATGCATTTTGAAACCCTCGCCATTCACGACGGACAGGCGCCCGACCCACAAACAGGGTCGGTAACGGTACCCATCTACCA
GACCTCAACCTTTGCACGCGAACAGCTGGAGTACAAAGGGGGTTTTGTCTATTCCAGAATAGGCAACCCCACCCGCCAGG
CGCTTGAAGAGGCGCTCGCCCTTCTTGAAAACGGCCGCTACGGTCTGGCCTTCGCTTCCGGAGCGGCGGCAACCATGGCC
GCACTGCATCTTCTCCGACCCGGCGACCATATTGTCTCCGGCATTGACATCTATGGTGGTACCTACAGAATCTTTGAAGA
GCTTCTCCGTCCTATGGGCATCACCACATCATACGCGGAAGGCTCCACAACACAAAGCTATCTGGATGCCTGCACGCCTG
AAACCAGAGTGATATGGGTGGAAAGCCCGAGCAACCCGCTGATGCGCCTTGCAGACATCAGGGCACTGGCACAGGCGGCC
CATGAAAGGGGAATGCTTCTGGCTGTCGACAACACCTTTCTCTCCCCCTATTTCCAGCGCCCTCTTGAGTGCGGCGCCGA
CATTGTCATACACAGCACCACCAAATACCTCGCCGGCCACAGCGATGTGCTGGGTGGAGCGGTCATTACGAATGAGGAAA
AGCTGCACGCAACAGTCAAAACATACCAGGCTGCAGCCGGAGCAGTTCCTGCCCCTTGGGACTGCTGGCTTGTCATGCGG
GGGCTGAAAACCCTCAAGGTCCGCATGAAAGAGCATGAAGCCAACGCCATGCAGCTCGCCCGTTTTCTTGAAAGTCATCC
GGCAGTCAAACGGGTGCTCTACCCCGGGCTCTCCTCACATCCGCAGCACATTCTGGCAAAAAGCCAGATGAGCGGCTTCG
GTGGCATGCTCACAATTGAAATGAAAGGAGGAATGGAGGCCGTCAGGAAACTTATTTCAGGGGTAAAGCTGTTTCTCCTT
GCTGACAGCCTCGGAGGCGTGGAATCGCTTATCGCCTCACCGGCAAGAATGACACTCTGGGCACTCTCGCCAGAGGAGCG
AATGAAAAGGGGGTGCAGTGAGGGCCTCGTCAGAATCTCCGTCGGTCTTGAACACCCCGACGACCTTCAGGCCGACCTGG
AACAGGCTATTGAAGGGTGCGGGTGA

Protein sequence :
MHFETLAIHDGQAPDPQTGSVTVPIYQTSTFAREQLEYKGGFVYSRIGNPTRQALEEALALLENGRYGLAFASGAAATMA
ALHLLRPGDHIVSGIDIYGGTYRIFEELLRPMGITTSYAEGSTTQSYLDACTPETRVIWVESPSNPLMRLADIRALAQAA
HERGMLLAVDNTFLSPYFQRPLECGADIVIHSTTKYLAGHSDVLGGAVITNEEKLHATVKTYQAAAGAVPAPWDCWLVMR
GLKTLKVRMKEHEANAMQLARFLESHPAVKRVLYPGLSSHPQHILAKSQMSGFGGMLTIEMKGGMEAVRKLISGVKLFLL
ADSLGGVESLIASPARMTLWALSPEERMKRGCSEGLVRISVGLEHPDDLQADLEQAIEGCG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-71 44
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-70 43
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-54 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cvib_1358 YP_001130871.1 cystathionine gamma-synthase BAC0207 Protein 1e-57 46