Gene Information

Name : Cvib_1308 (Cvib_1308)
Accession : YP_001130822.1
Strain : Chlorobium phaeovibrioides DSM 265
Genome accession: NC_009337
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1462019 - 1462858 bp
Length : 840 bp
Strand : +
Note : PFAM: Integrase, catalytic region; KEGG: mag:amb4429 transposase and inactivated derivative

DNA sequence :
ATGATTGAGAAAGAACATCCGAAAATCAGCCTGAACCGGCAGTGTGAACTGCTCTCGATTCACCGCTCAGGGCTGTATTA
TCAGCCACGGAGAAGCACGAAGCTGAACCGTGAGCTCATGCGCCTAGTGGATGAGCAGTACCTGCTCAAGCCCTACTACG
GTGTCTACCGTATGTGGGAATGGCTGGTAAAGGACAAAGGCTACAAGGTCAACATCAAGCGGGTCAGACGCCTCTGCCGC
TTGATGGGGTTGGAGGCCATAGGACCCAAACCGAACACATCGAAACCAGCACCCGGGCACAAGGTGTATCCGTATTTGCT
TCGAGGCCTGACCATACAGCGCTGCAATCAGGTCTGGGCCACCGATATCACCTATGTTCCAATGGCTCAGGGGTTCATGT
ATCTGATGGCAGTCATCGATCTCAAGAGCCGCTATGTGCTGAACTGGTCTGTATCGAATACGATGGACGCCACTTGGTGC
GCCGAGGTGTTCCGGGAAGCAGTCAGTATGCACGGTGCTCCGGAAATACTCAACACCGATCAGGGCAGTCAGTTCACCAG
CGAGGTCTTCACAACGGCTGTCATCAAAGAGGCCAAAGTGAAGCTCTCCATGGACGGTAGAGGACGGGCTATTGACAATG
TTTTCATCGAGCGGTTGTGGCGAAGCGTTAAATATGAGTACATTTACTACCGTCCCCCAGTCGACGGTATTGAACTCTAC
CAAGGGCTGAAGAACTGGTTCAATGATTACAATACGACTAGGCGGCACAAGTCTCTCAACGGAGAGGTTCCCGCCACTGT
TTATTACTCGCAGAAGGTCCAGGCCCCGGAGGCAGCATGA

Protein sequence :
MIEKEHPKISLNRQCELLSIHRSGLYYQPRRSTKLNRELMRLVDEQYLLKPYYGVYRMWEWLVKDKGYKVNIKRVRRLCR
LMGLEAIGPKPNTSKPAPGHKVYPYLLRGLTIQRCNQVWATDITYVPMAQGFMYLMAVIDLKSRYVLNWSVSNTMDATWC
AEVFREAVSMHGAPEILNTDQGSQFTSEVFTTAVIKEAKVKLSMDGRGRAIDNVFIERLWRSVKYEYIYYRPPVDGIELY
QGLKNWFNDYNTTRRHKSLNGEVPATVYYSQKVQAPEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACF06170.1 putative transposase Not tested Tn5036-like Protein 9e-51 50
ABK1_0264 YP_005512836.1 insB Not tested AbaR4d Protein 3e-42 46