Gene Information

Name : Cvib_1219 (Cvib_1219)
Accession : YP_001130733.1
Strain : Chlorobium phaeovibrioides DSM 265
Genome accession: NC_009337
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 1369483 - 1370541 bp
Length : 1059 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: plt:Plut

DNA sequence :
ATGTATAAGGATTCAGAACTCAGAACTCAGAACTCAGCACTAATGAAAGTACTTGTTACCGGCGCTGCCGGTTTTATTGG
CTCCAATGTTTCCCGCAGGCTTCTGGAGCGGGGCGACCGGGTGACGGGAATTGACAATATGAACGACTACTACGATGTGT
CGCTCAAAGAGGCACGGCTTGAGAGGCTGACCGGGCAGGAGAACTTCCGATTTGTGAAGATGGATCTGGCCGATCGCAAG
GCTATGGAGGAGCTGTTTGCTGAAGGGGGGTTCGACCGTGTTGTCAATCTGGCGGCTCAGGCCGGTGTGCGGTATTCGCT
CATCAACCCCCATTCATACATTGAGAGCAATATTCTCGGCTTTACCAACATTCTTGAGGGATGCCGCCACAACGGGGTGG
AGCATCTGGTTTACGCCTCATCAAGCTCCGTGTATGGGGCCAATGAAACTATGCCGTTTTCCGTGCATGACAATGTTGAT
CATCCACTTTCCCTCTATGCTGCCAGCAAGAAAGCCAATGAGCTGATGGCACATACCTACAGCCACCTGTATCAGCTTCC
GACCACAGGTCTTCGTTTCTTCACCGTCTACGGCCCCTGGGGACGGCCCGACATGGCGCTTTTCCTTTTCACCGATGCCA
TCATCAAGGGAAAGCCGATCAAGGTGTTCAACTACGGGAAGCACCGGAGGGACTTCACCTACATTGACGACATCGTCGAG
GGGGTCATCCGCACACTTGATCATGTTGCAGAACCCAATCCTGATTGGTCAGGCCTGCAGCCTGATCCTGGTTCAAGCCG
GGCCCCATGGAGAGTCTACAACATCGGCAACAGCAAACCGGTTGAGCTGATGGATTACATCGGCGCCCTTGAACGCGAGC
TTGGAAAAACAGCCGAAAAAGAGTTTCTGCCGCTCCAGCCGGGCGATGTGCCAGATACCTACGCCGATGTGGAACAACTC
ATGGAGGATGTGCAGTACAAGCCCCAGACCTCCGTTGACGAAGGAATCAAGCGGTTTGTGGTCTGGTACCGGGAATACTA
CGGAATTCCCGCACCCTGA

Protein sequence :
MYKDSELRTQNSALMKVLVTGAAGFIGSNVSRRLLERGDRVTGIDNMNDYYDVSLKEARLERLTGQENFRFVKMDLADRK
AMEELFAEGGFDRVVNLAAQAGVRYSLINPHSYIESNILGFTNILEGCRHNGVEHLVYASSSSVYGANETMPFSVHDNVD
HPLSLYAASKKANELMAHTYSHLYQLPTTGLRFFTVYGPWGRPDMALFLFTDAIIKGKPIKVFNYGKHRRDFTYIDDIVE
GVIRTLDHVAEPNPDWSGLQPDPGSSRAPWRVYNIGNSKPVELMDYIGALERELGKTAEKEFLPLQPGDVPDTYADVEQL
MEDVQYKPQTSVDEGIKRFVVWYREYYGIPAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1I AAA64648.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 6e-103 61