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Name : Cvib_1182 (Cvib_1182) Accession : YP_001130696.1 Strain : Chlorobium phaeovibrioides DSM 265 Genome accession: NC_009337 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1328382 - 1329674 bp Length : 1293 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGACATCACCCTGCTCCGCGACTCCCCTGATGAAATAGTCACTATGCTGCATAACCGGCAGCAACCTGAAGACGA ACCAAAACTTCGCCAGCTCCTTGAAGAGGACGCGGAACGAAGAAAACTTGTTCAGGAAAGCGATGAACTCAAATCACTCA GGAACCGGAAGTCGAAGGAAATTGCGGAAATCAAAAAAAGCGGCTCCGGCTCCGCTGATGCCCTTATCCTTGAAATGCAG TCGGTCGGCACAGCCATTGCCGAGATGGACAGCCGCCTTACTGCCCTTGAAACCTCAATGGAGGATATTCTCCTTGCACT TCCCAACCGTCTGCACCCTTCGGTTCCGGTTGGTCGCTCTGCTGAAGAGAACGAAGTATTCGGCGAACCTGTCAGCTTTA CCCACCCGCTTGATTTTTCGCTGAAAAACCATCTTGAACTGGGAAAGTCGCTGGGCATCCTTGATTTTGAACGCGGAGCA AAGGTCAGCGGCGCCGGGTTCCCTGTCTATGTAGGGAAAGGAGCCCGCCTTGAACGGGCCCTCATCAACTTCATGCTCGA CAGCCATACAGAAAAGCATGGCTACAAAGAGGTTTTCCCTCCCTTTATGGTCAACCGCGAGTCATTGAGGGGAACGGGGC AATGGCCGAAATTCGCCGGCGAAGTGTACCACGCGCCCGAAGATGAGCTCTACCTTATACCGACTGCTGAAGTCCCCGTC ACCAACCTGCATCGCGGCGAACTTCTTGAAACAGAATCTCTCCCCATCTCCTATGCAGCCTATTCGGCCTGCTTCAGAAG AGAGGCCGGAAGCTATGGAAAAGAGACCCGGGGCTTTCTCAGAGTGCACCAGTTCAACAAGGTTGAAATGGTCAAATTCA CCAAGCCGGAAGACTCATACCAGGCACTTGAAGATATCAGGGGCCACGCAGAAGCAATACTCAGAGCCCTTGAGATTCCC TACCGGGTGCTCCTGCTCTGCAGCGGAGACATCAGCGCGAACGCTGCAAAATGTTATGATATAGAGGTATGGTCGCCTGC TGAAGAGAAGTACCTGGAGGCGTCAAGCTGCTCAAACTTCGAGGATTATCAGGCAAGAAGGGCAAATATCCGGTTCCGCA GGGATGGGAAATCAAAACCCGAATTTGTCCATACCCTGAACGGATCAGGACTTGCCACCTCGCGCCTCATGGTCTCACTG ATGGAGCACTATCAGACCCCTGAAGGAGGAATTCTCGTACCTGAAGTCCTCAAACCCTATACCGGGTTCAGCGAAATCAC TCCTTCCGCATAA Protein sequence : MLDITLLRDSPDEIVTMLHNRQQPEDEPKLRQLLEEDAERRKLVQESDELKSLRNRKSKEIAEIKKSGSGSADALILEMQ SVGTAIAEMDSRLTALETSMEDILLALPNRLHPSVPVGRSAEENEVFGEPVSFTHPLDFSLKNHLELGKSLGILDFERGA KVSGAGFPVYVGKGARLERALINFMLDSHTEKHGYKEVFPPFMVNRESLRGTGQWPKFAGEVYHAPEDELYLIPTAEVPV TNLHRGELLETESLPISYAAYSACFRREAGSYGKETRGFLRVHQFNKVEMVKFTKPEDSYQALEDIRGHAEAILRALEIP YRVLLLCSGDISANAAKCYDIEVWSPAEEKYLEASSCSNFEDYQARRANIRFRRDGKSKPEFVHTLNGSGLATSRLMVSL MEHYQTPEGGILVPEVLKPYTGFSEITPSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-92 | 48 |
