Gene Information

Name : SpyM51162 (SpyM51162)
Accession : YP_001128704.1
Strain : Streptococcus pyogenes Manfredo
Genome accession: NC_009332
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1159625 - 1160311 bp
Length : 687 bp
Strand : -
Note : Possible alternative translational start site. Similar to SpyM51690, 59.908% identity (59.908% ungapped) in 217 aa overlap

DNA sequence : 
ATGCAATTATCAAATATTGTGAAGAGCTATCAAAATGGGGATCAAGTTCTTAAAGTTTTGAAAGGTATTAATTTAACAGT
ATATGAGGGTGAATTTTTAGCTATTATGGGTCCGTCTGGCTCGGGAAAATCAACACTAATGAATATTATTGGTTTATTAG
ATCGGCCAACATCCGGAGATTACACATTACATAATACTAAAATAGAAATCCTTAATGATCGTGAATTAGCAAACGTACGA
AATGATGAAATCGGCTTTGTCTTTCAACAATTCTTTCTGTTAGCTAAATTAACTGCATTACAAAATGTTGAGTTGCCTCT
TATTTATGCTGGTGTAAACGTCTCAAAAAGACGTGAACAGGCTAAGCAATTTCTTGAAAAAGTAGGACTTGGACGACGTA
TCAAACATCTACCGTCAGAACTGTCAGGAGGTCAAAAGCAAAGGGTGGCTATCGCACGAGCTTTAGTAAATGACCCATCT
ATTATTTTAGCGGATGAACCAACAGGTGCACTAGATACTAAAACAGGTCAGCAAATTATGGAACTCTTGACAGAGTTAAA
CAAAGAAGGTAAAACAATTATTATGGTTACTCATGAACCAGAAATTGCTGATTTTGCAACTCGGAAAATTATTATTCGTG
ATGGTGATATCACAACGGATACTACAGCTAGTGTTGTTATTGACTAG

Protein sequence : 
MQLSNIVKSYQNGDQVLKVLKGINLTVYEGEFLAIMGPSGSGKSTLMNIIGLLDRPTSGDYTLHNTKIEILNDRELANVR
NDEIGFVFQQFFLLAKLTALQNVELPLIYAGVNVSKRREQAKQFLEKVGLGRRIKHLPSELSGGQKQRVAIARALVNDPS
IILADEPTGALDTKTGQQIMELLTELNKEGKTIIMVTHEPEIADFATRKIIIRDGDITTDTTASVVID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-34 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 44
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 4e-33 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-32 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SpyM51162 YP_001128704.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-73 74
SpyM51162 YP_001128704.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-44 49
SpyM51162 YP_001128704.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-35 45
SpyM51162 YP_001128704.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-37 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SpyM51162 YP_001128704.1 ABC transporter ATP-binding protein VFG0869 Protein 8e-29 43