Gene Information

Name : GTNG_3486 (GTNG_3486)
Accession : YP_001127564.1
Strain :
Genome accession: NC_009329
Putative virulence/resistance : Unknown
Product : IS21 family transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 41157 - 41915 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence :
ATGACAACAGAAATCCTTTTAGACCATATCACGAAGCAATTGAGAATGCCTACAATTGCAAAACAATATCGCTCTCTCGC
AAGAGAGGCAGAAGAAAGAAATCTACGGTATGAAGAATACTTATTGGCACTATTAGAAGCAGAAGTGCAGGCAAGAGAGG
AAAATCAAAGACAGCGAAGGCTCAAACAAGCTGCCTTTCCCATCCACAAAACTTTAGACACCTATGATTTTACTTTCATG
CCGAGCTTAAATCGAAATCGATTTCTCACACTCGCAAAAGGTGAGTTTGCAGAGAGAAAAGAGAATATTATTTTTCTAGG
GAATAGTGGCACAGGGAAAACCCATTTGGCCATTGGGCTTGGAATCGCCATGATCCAAAATGGCTACAAAACAAAATTCA
TTACTGCTTCCGAGTTAGTGGAAGAGTTGCTTATTGCTAAAGAAGAGCACAAACTTGGTGCGTTTGAGAAGAAGTGGCTT
AAATATGATGTGATCATCGTAGATGAACTGGGATATATCCCCTTTTCCAAAACAGGAGCAGAGCTATTATTTCAGTTCTT
TTCCAATCGCTATGAACGTGCAAGTGTCATCATTACAACAAATCTTGAATTTGTAGAATGGACGAACATTTTTGGGGATG
AAAAGATGACAGCAGCGTTGCTTGATCGGCTCACTCACCGTTCGCACATTCTTCTTCTAAACGGAGAATCTTATCGATTC
CGTCAAAGTATGAAACAGAGGGAAAATGGGGAGTGGTAG

Protein sequence :
MTTEILLDHITKQLRMPTIAKQYRSLAREAEERNLRYEEYLLALLEAEVQAREENQRQRRLKQAAFPIHKTLDTYDFTFM
PSLNRNRFLTLAKGEFAERKENIIFLGNSGTGKTHLAIGLGIAMIQNGYKTKFITASELVEELLIAKEEHKLGAFEKKWL
KYDVIIVDELGYIPFSKTGAELLFQFFSNRYERASVIITTNLEFVEWTNIFGDEKMTAALLDRLTHRSHILLLNGESYRF
RQSMKQRENGEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
istB AAN62229.1 putative NTP-binding protein of insertion sequence Not tested PAGI-3(SG) Protein 2e-40 47
EC042_4097 YP_006098380.1 putative transposase Not tested Tn2411 Protein 5e-38 44
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 9e-33 42
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 5e-35 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 6e-35 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 5e-35 42
unnamed CAA21402.1 - Not tested HPI Protein 6e-35 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 5e-35 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 5e-35 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 5e-35 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 5e-35 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 3e-34 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 6e-35 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 6e-35 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 5e-35 42
orfB AAC61729.1 OrfB Not tested PAI I CFT073 Protein 7e-30 41
c3608 NP_755483.1 hypothetical protein Not tested PAI I CFT073 Protein 7e-30 41
c5145 NP_756993.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GTNG_3486 YP_001127564.1 IS21 family transposase VFG1460 Protein 5e-33 42
GTNG_3486 YP_001127564.1 IS21 family transposase VFG1663 Protein 2e-34 42
GTNG_3486 YP_001127564.1 IS21 family transposase VFG1515 Protein 3e-35 42
GTNG_3486 YP_001127564.1 IS21 family transposase VFG1627 Protein 3e-35 42
GTNG_3486 YP_001127564.1 IS21 family transposase VFG1606 Protein 3e-35 42
GTNG_3486 YP_001127564.1 IS21 family transposase VFG1729 Protein 3e-30 41