Gene Information

Name : GTNG_0856 (GTNG_0856)
Accession : YP_001124979.1
Strain : Geobacillus thermodenitrificans NG80-2
Genome accession: NC_009328
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease-like protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 931807 - 933942 bp
Length : 2136 bp
Strand : -
Note : -

DNA sequence :
ATGCGTTGTCAAGCATGCCAACAACGGGAAGCAACAGTGTTTGTCAACTTACAATGGAACGGTGAGAAAAAGCAACTTCA
TCTTTGCCATACATGCTATGAAAAGCAAAAACAACAATTGTCGATTCCGATAAACTTCGGCTTTTCGCCGTTTTCATTCG
ATGACTGGTTCACCGACCACTTTGCGACGGCCAACGCTCAAGCAGTCGGACCAGAAACAGCAGCCAAACGTCCGCAGCGC
CACGGCGGTGGATTTTTGGATCAATTCGGCCGCAACTTGACACAAATGGCTAAGGCGGGCTTGATTGACCCAGTCATCGG
CCGCGACAAAGAAATCGCACGTGTCATTGAAATTTTAAACCGCCGCAACAAAAACAACCCGGTTTTGATCGGAGAGCCGG
GCGTCGGAAAAACAGCCATCGTCGAAGGGCTTGCTCTGAAGATTGGCGAAGGGCAAGTGCCAGAAAAACTGTTGAACAAA
GAAGTGTACTTGCTTGATGTTGCATCGCTCGTCGCCAACACCGGCATCCGCGGTCAATTTGAAGAGCGGATGAAACGGCT
CATCACCGAACTGCAAGAGCGGAAAAACATCATCTTGTTCATCGACGAAATTCATCTGCTCGTCGGTGCCGGCGCTGCCG
AAGGGTCGATGGACGCCGGCAACATTTTGAAGCCGGCGCTCGCCCGTGGTGAGCTGCAAGTCGTCGGGGCGACAACATTG
AAAGAATACCGGCAAATTGAAAAAGACGCCGCCCTTGAGCGCCGTTTCCAACCGGTCATCGTCCACGAGCCGACCGTTGA
CGAAGCAATTGCCATCTTAAGAGGCATCCAGCCAAAATACGAACAATTCCATCATGTCCGCTATACGGATGAAGCGATCG
AAGCGTGCGTCAAACTTGCGCACCGCTATATCCAAGACCGCTTCCTCCCGGATAAGGCGATCGATTTGCTTGATGAAGCC
GGCTCGAAAGCGAACTTGCGTCTCGGACCGACCGATGAGAAACAATTGCAAGAGCGGTTGATGCAAATCGCGAAAGAAAA
GGATCAAGCAGCTAAAGAAGAAAACTATGAACTGGCGGCAAAACTGCGCGATGAAGAGCTGAAGCTTGAGAAACAACTCG
AACAAGGCGTCACCCAAGAGCACCCTGTTGTGGATGTCGCCGACATCGAGCGGATCATCGCTGACAAAACAGGCATCCCG
GTCGGCAAGCTGCAAGCTGATGAAAAAGAAAAAATGAAACATCTTGAAGACAATTTGGCGAAAAAAGTGATCGGCCAAGC
AGAAGCAGTGAAAAAAGTCGCCAAAGCGATTCGTCGCAGCCGCGCCGGCTTGAAAGCGAAACACCGCCCAGTCGGTTCGT
TCTTGTTCGTCGGTCCGACCGGCGTCGGGAAAACGGAGCTTGCCAAAACGCTCGCCGAGGAGCTGTTCGGCACAAAAGAT
AGCATGATACGCCTTGATATGAGTGAATACATGGAAAAACATTCGGTCTCAAAACTGATCGGCTCGCCGCCAGGCTATGT
CGGCTTTGAAGAAGCCGGCCAGCTGACGGAGAAAGTGCGCCGCAATCCATACAGCATCATCTTGCTTGACGAGATTGAAA
AAGCGCACCCGGATGTTCAGCACATCTTCCTGCAAATTTTAGAAGACGGCCGCTTGACCGACAGTCAAGGCCGCACCGTC
AGCTTCAAAGACACAGTCATCATCGCAACAAGCAACGCTGGTGTAACCGACAAAAAAATCACCGTCGGCTTTGAAAAACA
AAGCGGTGGCGCTTCAAGCATTCTCGACTCTCTGAGCGCCTACTTCAAGCCGGAATTCTTAAACCGCTTCGACGCCATTA
TCGAGTTCAAGCCGCTTGAAAAAGCGCATTTGCTTCAAATTGTCGACTTGATGCTCGATGACGTCAAAACAGCGATGCGC
GAACAAGGCATCGAACTCAAAGTGACCGAAGCGGCGAAAGAAAAACTGGCCGAACTCGGCTATCATCCAGCCTTCGGCGC
CCGTCCGCTCCGCCGCGTCATTCAAGAACATGTCGAAGACAACATCGCTGACTGCCTGCTTGACGCGAACCAACCGGTGC
ACACGATCCGCGTCGACGTCAACGACGGCGCCATTGTAGCGCAAATCGCATCATAA

Protein sequence :
MRCQACQQREATVFVNLQWNGEKKQLHLCHTCYEKQKQQLSIPINFGFSPFSFDDWFTDHFATANAQAVGPETAAKRPQR
HGGGFLDQFGRNLTQMAKAGLIDPVIGRDKEIARVIEILNRRNKNNPVLIGEPGVGKTAIVEGLALKIGEGQVPEKLLNK
EVYLLDVASLVANTGIRGQFEERMKRLITELQERKNIILFIDEIHLLVGAGAAEGSMDAGNILKPALARGELQVVGATTL
KEYRQIEKDAALERRFQPVIVHEPTVDEAIAILRGIQPKYEQFHHVRYTDEAIEACVKLAHRYIQDRFLPDKAIDLLDEA
GSKANLRLGPTDEKQLQERLMQIAKEKDQAAKEENYELAAKLRDEELKLEKQLEQGVTQEHPVVDVADIERIIADKTGIP
VGKLQADEKEKMKHLEDNLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPVGSFLFVGPTGVGKTELAKTLAEELFGTKD
SMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHIFLQILEDGRLTDSQGRTV
SFKDTVIIATSNAGVTDKKITVGFEKQSGGASSILDSLSAYFKPEFLNRFDAIIEFKPLEKAHLLQIVDLMLDDVKTAMR
EQGIELKVTEAAKEKLAELGYHPAFGARPLRRVIQEHVEDNIADCLLDANQPVHTIRVDVNDGAIVAQIAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 6e-155 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GTNG_0856 YP_001124979.1 ATP-dependent Clp protease-like protein VFG0080 Protein 0.0 63
GTNG_0856 YP_001124979.1 ATP-dependent Clp protease-like protein VFG0079 Protein 9e-158 53