Gene Information

Name : tnpC (GTNG_3423)
Accession : YP_001127505.1
Strain : Geobacillus thermodenitrificans NG80-2
Genome accession: NC_009328
Putative virulence/resistance : Unknown
Product : transposition regulatory protein TnpC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3533209 - 3533589 bp
Length : 381 bp
Strand : +
Note : -

DNA sequence :
ATGGCTAACTATGACCGTAGAGAACAATTGAAAGCCATTCACGCTGCAAGAAAGGCTCTCACCTATCAAAAAGTCGAAAA
AGCCATTAAAAGGCTCATACGAGCCAATGAGAGCATTAATTTTAATAGCGTAGCAAAGGAAGCAGGGGTAGCGAAAGCGA
CACTTTACAACCATCCTGAACTGCGTGAGCGTATTGAAACCTTACGCCAACAACAAGCACAAGCTCCTACTGCGAAACAA
ATAAAGCGAGAAATGAATGAGAGCAACAAAGACGCTCTTATTGAATCGTTGAAACGAAAAATCAAAAAGTTAGAAGACGA
AAACAAGCAATTACGGGAACAGTTAAAAGTAGCTTACGCAGAGGTTTATAAAAAGTTTTAG

Protein sequence :
MANYDRREQLKAIHAARKALTYQKVEKAIKRLIRANESINFNSVAKEAGVAKATLYNHPELRERIETLRQQQAQAPTAKQ
IKREMNESNKDALIESLKRKIKKLEDENKQLREQLKVAYAEVYKKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpC BAC57472.1 transposase C Not tested Type-IIIinv SCCmec Protein 1e-15 41
tnpC BAA82203.1 transposaseC Not tested Type-II SCCmec Protein 1e-15 41
tnpC1 YP_039524.1 transposase C 1 Not tested Type-II SCCmec Protein 2e-15 41
tnpC NP_370578.1 transposase C Not tested Type-II SCCmec Protein 2e-15 41
tnpC NP_373290.1 transposase for Tn554 Not tested Type-II SCCmec Protein 2e-15 41
tnpC-3 YP_190050.1 transposase C Not tested Type-II SCCmec Protein 2e-15 41
tnpC BAB47665.1 transposase C(Tn554) Not tested Type-III SCCmec Protein 1e-15 41
tnpC BAC53827.1 transposase C(Tn554) Not tested SRImec-III and SCCmec-III region Protein 1e-15 41