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Name : yycF (GTNG_3415) Accession : YP_001127497.1 Strain : Geobacillus thermodenitrificans NG80-2 Genome accession: NC_009328 Putative virulence/resistance : Resistance Product : two-component response regulater Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 3522441 - 3523154 bp Length : 714 bp Strand : - Note : - DNA sequence : ATGGAAAAACGCATTTTAGTTGTTGATGATGAAAAACCGATTGCTGATATTTTGCAATTTAACTTACAAAAAGAAGGATA CGAAGTGATTTGCGCTTACGACGGTGAAGAAGCGCTTCAAAAAGTAGAAGAAACAATGCCGGATTTAATTTTGCTTGATA TTATGCTTCCGCTAAAAGATGGGATGGAAGTATGCCGCGAAGTGCGAAAAAAATACGATATGCCAATTATTATGCTGACG GCGAAAGACTCGGAGATTGATAAAGTGCTTGGACTGGAGCTCGGAGCAGACGATTATGTCACCAAACCGTTCAGCACGCG GGAGCTATTGGCGCGGGTGAAAGCGAACTTGCGCCGCCATGCGCAAACAGCGACCCAAGAGGAAGAGGAGAGCGAAACGA ATGAAATCGTCGTCGGTCCGCTTGTAATCCGTCCGGACGCGTATGTCGTACAAAAGCGCGGGGAAACGATTGAATTGACT CACCGCGAATTTGAACTGCTCCACTATTTGGCGAAACATATTGGCCAAGTGATGACGCGCGAGCATTTGTTGCAAACGGT CTGGGGTTATGACTATTATGGCGATGTACGCACGGTCGATGTAACGGTAAGACGGCTGCGTGAAAAAATTGAGGATAACC CTTCTCACCCGTCATGGATCGTTACTAGACGGGGGGTCGGCTACTACTTGCGCAACCCGGAACAGGAGTCATGA Protein sequence : MEKRILVVDDEKPIADILQFNLQKEGYEVICAYDGEEALQKVEETMPDLILLDIMLPLKDGMEVCREVRKKYDMPIIMLT AKDSEIDKVLGLELGADDYVTKPFSTRELLARVKANLRRHAQTATQEEEESETNEIVVGPLVIRPDAYVVQKRGETIELT HREFELLHYLAKHIGQVMTREHLLQTVWGYDYYGDVRTVDVTVRRLREKIEDNPSHPSWIVTRRGVGYYLRNPEQES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 3e-26 | 42 |
| vanRB | YP_008394254.1 | DNA-binding response regulator VanRB | Not tested | Not named | Protein | 1e-18 | 41 |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 1e-26 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yycF | YP_001127497.1 | two-component response regulater | NC_012469.1.7685629. | Protein | 6e-53 | 67 |
| yycF | YP_001127497.1 | two-component response regulater | NC_009641.5332272.p0 | Protein | 2e-45 | 55 |
| yycF | YP_001127497.1 | two-component response regulater | NC_013450.8614421.p0 | Protein | 2e-45 | 55 |
| yycF | YP_001127497.1 | two-component response regulater | NC_007793.3914279.p0 | Protein | 2e-45 | 55 |
| yycF | YP_001127497.1 | two-component response regulater | NC_003923.1003749.p0 | Protein | 2e-45 | 55 |
| yycF | YP_001127497.1 | two-component response regulater | NC_002745.1124361.p0 | Protein | 2e-45 | 55 |
| yycF | YP_001127497.1 | two-component response regulater | NC_009782.5559369.p0 | Protein | 2e-45 | 55 |
| yycF | YP_001127497.1 | two-component response regulater | NC_002951.3237708.p0 | Protein | 2e-45 | 55 |
| yycF | YP_001127497.1 | two-component response regulater | NC_002952.2859905.p0 | Protein | 2e-45 | 55 |
| yycF | YP_001127497.1 | two-component response regulater | NC_007622.3794472.p0 | Protein | 1e-45 | 55 |
| yycF | YP_001127497.1 | two-component response regulater | NC_002758.1121668.p0 | Protein | 2e-45 | 55 |
| yycF | YP_001127497.1 | two-component response regulater | HE999704.1.gene2815. | Protein | 2e-36 | 52 |
| yycF | YP_001127497.1 | two-component response regulater | NC_012469.1.7686381. | Protein | 1e-32 | 50 |
| yycF | YP_001127497.1 | two-component response regulater | AE016830.1.gene1681. | Protein | 5e-36 | 47 |
| yycF | YP_001127497.1 | two-component response regulater | AE000516.2.gene3505. | Protein | 2e-26 | 47 |
| yycF | YP_001127497.1 | two-component response regulater | AF155139.2.orf0.gene | Protein | 1e-27 | 46 |
| yycF | YP_001127497.1 | two-component response regulater | FJ349556.1.orf0.gene | Protein | 7e-31 | 46 |
| yycF | YP_001127497.1 | two-component response regulater | AM180355.1.gene1830. | Protein | 2e-31 | 45 |
| yycF | YP_001127497.1 | two-component response regulater | HE999704.1.gene1528. | Protein | 7e-23 | 44 |
| yycF | YP_001127497.1 | two-component response regulater | CP001918.1.gene5135. | Protein | 2e-26 | 44 |
| yycF | YP_001127497.1 | two-component response regulater | NC_005054.2598277.p0 | Protein | 9e-29 | 43 |
| yycF | YP_001127497.1 | two-component response regulater | NC_014475.1.orf0.gen | Protein | 9e-29 | 43 |
| yycF | YP_001127497.1 | two-component response regulater | BAC0533 | Protein | 3e-30 | 43 |
| yycF | YP_001127497.1 | two-component response regulater | NC_002695.1.915041.p | Protein | 1e-30 | 43 |
| yycF | YP_001127497.1 | two-component response regulater | CP000647.1.gene4257. | Protein | 3e-30 | 43 |
| yycF | YP_001127497.1 | two-component response regulater | CP000034.1.gene3834. | Protein | 1e-30 | 43 |
| yycF | YP_001127497.1 | two-component response regulater | CP004022.1.gene3215. | Protein | 6e-31 | 43 |
| yycF | YP_001127497.1 | two-component response regulater | NC_002952.2859858.p0 | Protein | 5e-28 | 42 |
| yycF | YP_001127497.1 | two-component response regulater | NC_007622.3794948.p0 | Protein | 5e-28 | 42 |
| yycF | YP_001127497.1 | two-component response regulater | NC_003923.1003417.p0 | Protein | 5e-28 | 42 |
| yycF | YP_001127497.1 | two-component response regulater | NC_013450.8614146.p0 | Protein | 5e-28 | 42 |
| yycF | YP_001127497.1 | two-component response regulater | NC_002951.3238224.p0 | Protein | 5e-28 | 42 |
| yycF | YP_001127497.1 | two-component response regulater | NC_007793.3914065.p0 | Protein | 5e-28 | 42 |
| yycF | YP_001127497.1 | two-component response regulater | NC_002758.1121390.p0 | Protein | 5e-28 | 42 |
| yycF | YP_001127497.1 | two-component response regulater | NC_010079.5776364.p0 | Protein | 5e-28 | 42 |
| yycF | YP_001127497.1 | two-component response regulater | AF162694.1.orf4.gene | Protein | 2e-26 | 42 |
| yycF | YP_001127497.1 | two-component response regulater | AF130997.1.orf0.gene | Protein | 7e-27 | 42 |
| yycF | YP_001127497.1 | two-component response regulater | CP001138.1.gene4273. | Protein | 8e-30 | 42 |
| yycF | YP_001127497.1 | two-component response regulater | DQ212986.1.gene4.p01 | Protein | 1e-30 | 42 |
| yycF | YP_001127497.1 | two-component response regulater | AF310956.2.orf0.gene | Protein | 5e-19 | 41 |
| yycF | YP_001127497.1 | two-component response regulater | BAC0125 | Protein | 1e-22 | 41 |
| yycF | YP_001127497.1 | two-component response regulater | AE015929.1.gene1106. | Protein | 5e-23 | 41 |
| yycF | YP_001127497.1 | two-component response regulater | EU250284.1.orf4.gene | Protein | 3e-29 | 41 |
| yycF | YP_001127497.1 | two-component response regulater | BAC0596 | Protein | 6e-23 | 41 |
| yycF | YP_001127497.1 | two-component response regulater | NC_002695.1.916589.p | Protein | 3e-24 | 41 |
| yycF | YP_001127497.1 | two-component response regulater | BAC0039 | Protein | 3e-24 | 41 |
| yycF | YP_001127497.1 | two-component response regulater | CP001138.1.gene2239. | Protein | 6e-23 | 41 |
| yycF | YP_001127497.1 | two-component response regulater | CP000034.1.gene2186. | Protein | 3e-24 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yycF | YP_001127497.1 | two-component response regulater | VFG1389 | Protein | 1e-21 | 44 |
| yycF | YP_001127497.1 | two-component response regulater | VFG1702 | Protein | 1e-26 | 42 |
| yycF | YP_001127497.1 | two-component response regulater | VFG1390 | Protein | 8e-25 | 41 |
| yycF | YP_001127497.1 | two-component response regulater | VFG1563 | Protein | 8e-27 | 41 |
| yycF | YP_001127497.1 | two-component response regulater | VFG1386 | Protein | 6e-23 | 41 |
