Gene Information

Name : spaF (GTNG_0274)
Accession : YP_001124403.1
Strain : Geobacillus thermodenitrificans NG80-2
Genome accession: NC_009328
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 310764 - 311453 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence :
ATGGGAGAGTATATGTTAGAGACCCATCATGTAAGCAAAGCGTTTGGGAAACAACTCGTCGTAGATGATGTATCCATTAA
AGTCAAGAAACAGACGGTTTATGGATTGCTCGGACCAAATGGAGCCGGAAAGTCAACCCTTTTAAAAATGCTGACAGGGC
TTTTGCGTCCTACGAAAGGGGAAATCATGATCAACGGCCATCCTTGGAGCAGAAAAGACTTAAAAGATATCGGTGTGCTG
ATCGAATCCCCTGCTCTTTACGGCAATCTAACGGCTCATGAAAACTTGCTTGTTCACGCTAAATTGCTTCATTTGCCTGA
GTCGCGGATCCAAGAAGTTTTGAACATCGTCGGCTTAGAAAATACAGGGAAAAAGAAAGCATCTCAATTTTCCCTCGGAA
TGAAACAGCGATTAGGAATTGCCAAAGCGCTTTTAAACCATCCAAAGCTGATCATTCTCGACGAACCAACAAACGGCTTG
GACCCATTAGGCATACAGGACTTGCGAAAACTCATTCAATCGTTTACCGAAAACGGGATCACCGTCATTCTATCGAGCCA
TATTTTGTCCGAAGTTAAGCAATTAGCCGATTATATTGGCATTATCCAAAACGGAAAACTCAGGTACGAAGGGAAAATAG
ACGAAAGTCAAGATCTCGAAAAACTCTTTGTCGATGTAGTGAACGAGTAA

Protein sequence :
MGEYMLETHHVSKAFGKQLVVDDVSIKVKKQTVYGLLGPNGAGKSTLLKMLTGLLRPTKGEIMINGHPWSRKDLKDIGVL
IESPALYGNLTAHENLLVHAKLLHLPESRIQEVLNIVGLENTGKKKASQFSLGMKQRLGIAKALLNHPKLIILDEPTNGL
DPLGIQDLRKLIQSFTENGITVILSSHILSEVKQLADYIGIIQNGKLRYEGKIDESQDLEKLFVDVVNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 9e-49 53
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 2e-41 49
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 2e-41 48
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 2e-41 48
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 2e-41 48
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 2e-41 48
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 1e-42 47
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 1e-42 47