Gene Information

Name : GTNG_3117 (GTNG_3117)
Accession : YP_001127207.1
Strain : Geobacillus thermodenitrificans NG80-2
Genome accession: NC_009328
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3216902 - 3218422 bp
Length : 1521 bp
Strand : +
Note : -

DNA sequence :
ATGATTTACGCACAACCAGGCCAGCCAGGAGCGCTTGTCACGTTCAAAAAGCGCTACGAAAACTTTATTGGCGGAAAATG
GGTGCCGCCGGTCGATGGCGAATATTTCGAAAACATTACGCCGATCACCGGAAAGCCGTATTGCGAAGTGCCGCGCTCAA
AAGCGGCAGACATCGAACTGGCGCTTGACGCTGCCCACGCGGCGAAAGACGAGTGGGGACGCACCTCTCCGGCCAAACGC
GCCCGCCTGTTGAACAAAATCGCCGACCGCATGGAAGAAAACTTGGAGCTGCTCGCCGTCGCAGAAACGTGGGAAAACGG
CAAACCGATTCGCGAAACATTGGCAGCTGACATTCCACTTGCCATTGACCATTTCCGCTATTTCGCCAGCTGCATCCGCG
CCCAAGAAGGCACGATCTCGGAGATCGACCATGATACGGTCGCCTATCACTTCAAAGAACCGCTCGGCGTCGTCGGGCAA
ATCATCCCGTGGAACTTCCCGATTTTAATGGCAGCCTGGAAACTCGCTCCGGCGCTCGCAGCCGGCAACTGCGTCGTCCT
GAAACCGGCGGAGCAAACGCCGACGTCGATCCTCGTCCTCATCGAACTCATCGAAGATTTGCTTCCACCTGGTGTCGTCA
ACATTGTCAACGGATTTGGCTTAGAAGCCGGCAAACCGCTCGCCTCAAACCCGCGCGTCGCGAAAGTGGCGTTCACCGGC
GAAACGACAACCGGACGGCTCATCATGCAATACGCGTCGCAAAACATCGTGCCGGTCACCTTAGAACTTGGCGGCAAATC
CCCGAACATTTTCTTCGCTGACGTGATGGACAAAGATGACGAATTTTTCGATAAAGCGCTCGAAGGGTTTACGATGTTCG
CCTTAAACCAAGGCGAAGTGTGCACATGCCCGTCGCGCGCCCTCATTCACGAGTCGATTTACGACGCCTTCATGGAACGG
GCGCTTGAGCGCGTCAAACAAATTAAGCAGGGCAATCCGCTCGACACGGAAACGATGATCGGCGCGCAAGCTTCGTCTGA
GCAGCTCGAAAAAATCTTGTCGTACATCGACATCGGCAAGCAGGAAGGGGCCGAGCTTCTCATCGGCGGCGAGCGGAACA
TGCTTGAAGGGGAACTGGCCGGCGGCTATTACGTCAAGCCGACCATTTTCAAAGGGCATAACAAAATGCGCATTTTCCAA
GAAGAAATTTTCGGGCCGGTGCTTGCCGTCACGACGTTTAAAGACGAAGACGAAGCGCTCGCCATCGCCAACGAAACGTT
GTACGGCCTCGGCGCCGGCGTCTGGACGCGCAACATCAACACCGCCTACCGATTCGGCCGCGGCATCCAGGCCGGCCGCG
TTTGGACGAACTGCTACCACGTCTACCCAGCCCACGCCGCGTTTGGCGGCTACAAAATGTCCGGCATCGGCCGCGAAACA
CACAAAATGATGCTCGACCATTACCAACAAACGAAAAATATGCTTGTCAGCTATTCGCCGAAAAAACTCGGCTTGTTCTA
A

Protein sequence :
MIYAQPGQPGALVTFKKRYENFIGGKWVPPVDGEYFENITPITGKPYCEVPRSKAADIELALDAAHAAKDEWGRTSPAKR
ARLLNKIADRMEENLELLAVAETWENGKPIRETLAADIPLAIDHFRYFASCIRAQEGTISEIDHDTVAYHFKEPLGVVGQ
IIPWNFPILMAAWKLAPALAAGNCVVLKPAEQTPTSILVLIELIEDLLPPGVVNIVNGFGLEAGKPLASNPRVAKVAFTG
ETTTGRLIMQYASQNIVPVTLELGGKSPNIFFADVMDKDDEFFDKALEGFTMFALNQGEVCTCPSRALIHESIYDAFMER
ALERVKQIKQGNPLDTETMIGAQASSEQLEKILSYIDIGKQEGAELLIGGERNMLEGELAGGYYVKPTIFKGHNKMRIFQ
EEIFGPVLAVTTFKDEDEALAIANETLYGLGAGVWTRNINTAYRFGRGIQAGRVWTNCYHVYPAHAAFGGYKMSGIGRET
HKMMLDHYQQTKNMLVSYSPKKLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-144 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-153 64
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-153 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-153 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-152 64
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-63 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GTNG_3117 YP_001127207.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 9e-145 65