Gene Information

Name : rph (GTNG_2594)
Accession : YP_001126684.1
Strain : Geobacillus thermodenitrificans NG80-2
Genome accession: NC_009328
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : -
Position : 2703230 - 2703997 bp
Length : 768 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGAGAACGGACGGACGAAATAACCGCGAGCTGCGCCCTGTACATATACAACCGCATTATATCAAGCATGCTGAAGGCTC
GGTGCTGATTGAAATCGGCGACACGAGAGTGATTTGCACGGCGACGGTTGAAGACAAAGTACCGCCGTTTATGCGCGGTG
GCGGGAAAGGATGGATTACGGCCGAATATGGGATGTTGCCAAGAGCGACAGAACAACGGAATGCGAGGGAAGCAAGCAAA
GGGAAAGTGTCGGGACGCACGATGGAAATTCAGCGTCTGATCGGCCGGGCGCTCCGTTCGGTCGTTGAGTTGGAACAGCT
CGGCGAGCGGACCGTCTGGATTGACTGTGACGTCATTCAGGCGGACGGTGGAACACGAACGGCGTCGATCACCGGTGCGT
ATGTGGCGCTCGTGTTGGCGCTCTCCAAACTGGTTGCAGAAGGGAAGCTTGAGTCGCTCCCGGTTCGCGATTTTCTCGCT
GCCACGTCAGTCGGCATCGATCCTGAACACGGGGTTATTCTCGATTTAAATTACAGTGAGGACGCACGGGCGAAAGTCGA
CATGAACGTCGTCATGACCGGAGCCGGCCAGTTTGTCGAAATTCAAGGCACCGGGGAAGAAGCGTCTTTTTCGCGCGCTG
AGCTGGAGGAATTACTCGAGACGGCCCAACTAGGTATTGAACAGCTCATCACCATTCAGCGCCGTGTATTGGGGGAGCAG
GCAGCCCTCATCGGAGAGAAAGTAGAACAGGAGGGGAAATCAGAGTGA

Protein sequence :
MRTDGRNNRELRPVHIQPHYIKHAEGSVLIEIGDTRVICTATVEDKVPPFMRGGGKGWITAEYGMLPRATEQRNAREASK
GKVSGRTMEIQRLIGRALRSVVELEQLGERTVWIDCDVIQADGGTRTASITGAYVALVLALSKLVAEGKLESLPVRDFLA
ATSVGIDPEHGVILDLNYSEDARAKVDMNVVMTGAGQFVEIQGTGEEASFSRAELEELLETAQLGIEQLITIQRRVLGEQ
AALIGEKVEQEGKSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 3e-54 58