Gene Information

Name : GTNG_1944 (GTNG_1944)
Accession : YP_001126044.1
Strain : Geobacillus thermodenitrificans NG80-2
Genome accession: NC_009328
Putative virulence/resistance : Virulence
Product : ABC transporter membrane protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 2067928 - 2069214 bp
Length : 1287 bp
Strand : -
Note : -

DNA sequence :
ATGGCATTGGTAGTATTTGTCGGATCGCTGCTCGGCGTGATGGCGCTTGGGCTGCCGATCGCGTTTGCGTTGCTCGTCAG
CGGGGTTGCACTCATGTTTTATCTGAATATTTTTGATACACAAATCATAGCTCAAAACTTAATCAGCGGGGCGGACAGCT
TTCCGCTGATGGCCATTCCGTTCTTTATTCTCGCTGGGGAGTTGATGAACGCTGGTGGCATTTCAAAGCGGATCGTCCGC
TTTGCCTTGGCGCTTGTCGGCCACATCCGCGGTGGGTTGGGGTATGTTGCCATTATCGCTGGCGTTTTATTTGCCGGTCT
GTCTGGTTCAGCGGTAGCTGACACGGCAGCGCTCGGCGCCATTCTCATCCCGATGATGGTCAAGGCTGGATACAATCGCA
ACCGTTCGACAGGCCTCATTGCCGCCGGGGGCATCATTGCTCCGATCATTCCGCCGAGCATTCCGATGATCCTTTTCGGG
GTGACTAGCGGGGTGTCGATTACGAAACTGTTTATGGCCGGCATCGTCCCAGGCATTTTGCTTGGGATTATCTTGGCGGT
TTGCTGGTGGCTGGTGACCCGGAGAGATCAATTGGAAGTGCTTCCACGCCAGTCGGCGAAAGAGATTTGGCAGGCGGCTC
GTGAAGCGTTTTGGGCGCTGTTGTTGCCGGTGATTATCGTCGGTGGGCTTCGCGGAGGGGTGTTTACGCCGACAGAGGCT
GCGGTAGTAGCCGCCTTTTACGCCCTGTTTGTCGGTTTGTGCATTTACCGGGAACTGAAAGTCCGGAATTTGTTCCATGT
GCTCGTGGCCGCGTCAAAAACGACGAGCGTCGTCATGTTTTTGGTGGCAGCAGCTATGGTGTCAGCGTGGCTGATCACAG
TTGCCAATATTCCGTCCATTGTCACGGATGTGTTGGCGCCGTTTATAGAACATCCGTTGGTGCTTTTGTTAGCCATTAAT
GCGCTGGTGTTGTTGGTCGGGACGGCGATGGATTTGACGCCGACGGTGCTTATTTTAACTCCGGTGCTTATGCCGATTAT
CGAAAAAGCAGGGATCGATCCGGTGTATTTCGGGGTGCTGTTTATTCTAAACTGCAGCATCGGGTTGCTCACCCCGCCGG
TTGGTACGGTGCTAAACGTCGCCTGCGGAGTCGGGAAAATCGGGATGGAAGACATTCTGAAGGGGATTTGGCCGTTCTTA
TTAGCGGAAACGCTTTTGCTTCTGTTGCTCATTTTCTTCCCATCGCTCGTCACCGTGCCACTTGAGTGGTTTACTACAGG
TCACTGA

Protein sequence :
MALVVFVGSLLGVMALGLPIAFALLVSGVALMFYLNIFDTQIIAQNLISGADSFPLMAIPFFILAGELMNAGGISKRIVR
FALALVGHIRGGLGYVAIIAGVLFAGLSGSAVADTAALGAILIPMMVKAGYNRNRSTGLIAAGGIIAPIIPPSIPMILFG
VTSGVSITKLFMAGIVPGILLGIILAVCWWLVTRRDQLEVLPRQSAKEIWQAAREAFWALLLPVIIVGGLRGGVFTPTEA
AVVAAFYALFVGLCIYRELKVRNLFHVLVAASKTTSVVMFLVAAAMVSAWLITVANIPSIVTDVLAPFIEHPLVLLLAIN
ALVLLVGTAMDLTPTVLILTPVLMPIIEKAGIDPVYFGVLFILNCSIGLLTPPVGTVLNVACGVGKIGMEDILKGIWPFL
LAETLLLLLLIFFPSLVTVPLEWFTTGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 1e-43 43
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 9e-44 43
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 1e-43 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GTNG_1944 YP_001126044.1 ABC transporter membrane protein VFG1110 Protein 5e-44 43