Gene Information

Name : GTNG_0011 (GTNG_0011)
Accession : YP_001124143.1
Strain : Geobacillus thermodenitrificans NG80-2
Genome accession: NC_009328
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 20095 - 20979 bp
Length : 885 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
GTGGCATTGACAGGTACGGATCGCGTCAAACGAGGGATGGCGGAAATGCAAAAAGGCGGCGTAATTATGGACGTCGTAAA
TGCGGAACAAGCAAAAATTGCGGAGGCGGCAGGAGCTGTCGCGGTTATGGCGCTCGAGCGTGTCCCGGCAGACATTCGTG
CTGCTGGCGGTGTCGCGCGCATGGCAGACCCGACGGTGGTCGAAGAAGTGATGAACGCTGTGTCGATCCCGGTCATGGCG
AAAGTGCGCATCGGTCATTATGTGGAAGCGCGCGTCCTTGAGGCGCTTGGCGTTGACTATATCGATGAAAGTGAAGTATT
GACGCCGGCTGATGAGGAATTCCATATCGATAAACGGCAGTTTACGGTTCCGTTTGTATGCGGTTGTCGCGATTTGGGGG
AGGCTGCCCGCCGCATTGCTGAAGGGGCATCAATGCTACGGACAAAAGGGGAGCCGGGGACAGGCAACATTGTTGAAGCG
GTGCGCCATATGCGCAAGGTCAACGCGCAAATCCGTAAAGTTGTTAGCATGAGCGAAGACGAACTTGTCGCTGAGGCGAA
ACAGCTTGGGGCTCCGGTCGAAGTGTTGCGCGAAATTAAACGAATTGGTCGCCTCCCGGTCGTCAACTTCGCTGCTGGCG
GTGTCGCGACACCGGCTGACGCTGCTCTCATGATGCACTTAGGCGCAGACGGTGTCTTTGTCGGGTCGGGCATTTTCAAA
TCGGAAAACCCAGAAAAATATGCGCGTGCGATTGTTGAAGCGACAACTCATTACGAAGACTATGAGCTGATCGCCCACTT
GTCCAAAGGGCTGGGCGGTGCGATGCGCGGCATCGATGTCGCGACATTGTTGCCAGAGCACCGCATGCAAGAACGTGGCT
GGTAA

Protein sequence :
MALTGTDRVKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGVARMADPTVVEEVMNAVSIPVMA
KVRIGHYVEARVLEALGVDYIDESEVLTPADEEFHIDKRQFTVPFVCGCRDLGEAARRIAEGASMLRTKGEPGTGNIVEA
VRHMRKVNAQIRKVVSMSEDELVAEAKQLGAPVEVLREIKRIGRLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFK
SENPEKYARAIVEATTHYEDYELIAHLSKGLGGAMRGIDVATLLPEHRMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-75 65
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-75 65
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-75 65