Gene Information

Name : GTNG_1320 (GTNG_1320)
Accession : YP_001125435.1
Strain : Geobacillus thermodenitrificans NG80-2
Genome accession: NC_009328
Putative virulence/resistance : Virulence
Product : Iron(III) dicitrate transport ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1407600 - 1408412 bp
Length : 813 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAGCGCTGCAGGCGAAAGAGTTGACTTTAGCGTACGGGGAAGCGCTCATTATTGATCGCTTGCATTTAACGATTCC
AAAAGGAAAAGTGACGGTGTTGATCGGCGCGAACGGCTGTGGCAAATCGACGCTGCTGCGCGCTTTGGCCCGACTGTTAA
AGCCGACAGGCGGCGCCGTTTTGCTCGATGGAAAAGAGATTGCCAAACAGCCGACCAAAGAAATCGCCCGCCGGCTCGCC
ATTTTGCCGCAGTCGCCTACAGCTCCGGAAGGGCTGACTGTGTTGCAGCTCGTCAAGCAAGGGCGTTACCCATACCAAAC
GTGGCTAAAGCAATGGAGCGAAGAAGATGAGCGTGCCGTTGCGCGCGCCTTAGCGGCGACCGGGCTTACGGAGCTCGCCG
AGCGGCCGGTTGATTCACTTTCCGGCGGACAGCGTCAACGCGCGTGGATCGCCATGACACTGGCGCAAGAAACGGACATT
ATCTTGCTTGACGAGCCGACGACGTATTTGGATCTGGCACATCAAATTGACATTTTAGATTTATTGTTTGAGTTAAATGA
AAAAGAACAACGGACGATCGTCATGGTGCTCCACGATTTAAACTTGGCTTGTCGATATGCGCATCATCTCGTCGCCATTC
GCGACAAAACAGTGTATGCAGAAGGGAAGCCAGAACATGTCATTTCTCGCCAACTGGTGAAAGATGTATTTCAGATGGAC
TGCCAAATTACGTACGACCCGCTCTTTGGCACCCCGCTTTGCATCCCATACGGAAAAGGGCGGCACATTCTACAGAAAGA
AGGCGTATCGTGA

Protein sequence : 
MEALQAKELTLAYGEALIIDRLHLTIPKGKVTVLIGANGCGKSTLLRALARLLKPTGGAVLLDGKEIAKQPTKEIARRLA
ILPQSPTAPEGLTVLQLVKQGRYPYQTWLKQWSEEDERAVARALAATGLTELAERPVDSLSGGQRQRAWIAMTLAQETDI
ILLDEPTTYLDLAHQIDILDLLFELNEKEQRTIVMVLHDLNLACRYAHHLVAIRDKTVYAEGKPEHVISRQLVKDVFQMD
CQITYDPLFGTPLCIPYGKGRHILQKEGVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-57 51
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-57 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-57 50
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-53 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-53 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-53 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-53 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-49 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-50 46
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-50 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-50 45
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-50 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-50 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GTNG_1320 YP_001125435.1 Iron(III) dicitrate transport ATP-binding protein BAC0164 Protein 4e-50 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GTNG_1320 YP_001125435.1 Iron(III) dicitrate transport ATP-binding protein VFG0925 Protein 1e-59 53
GTNG_1320 YP_001125435.1 Iron(III) dicitrate transport ATP-binding protein VFG1042 Protein 3e-50 46