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Name : lysS (FTW_1899) Accession : YP_001122668.1 Strain : Francisella tularensis WY96-3418 Genome accession: NC_009257 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1780825 - 1782507 bp Length : 1683 bp Strand : - Note : - DNA sequence : ATGAGTAGTAAATTAAAAGATTTGATAAAAACAACGATAAAAGAATATTTAGAAGCTAATGATATCACAGTTAAAGATGC TATTAGAGGCAAGATTAGAGAGCAGATTAGTGAGTTTTTAGGCGAGGTAAGCGAGATAAATGAGCAGGTTAAAGAACAAA TTTCAGCGCTTGTGAAAAAGCATGTAACAGAATTACAAGAAAGCTCACAAATTGCTTTAAGAAAAGAAAAGCTAAAAACT TTAGCTCAGCAAAATAATGGCATAAGCCATCCAAATAGTTTCCGAAGAAATGCTGTTGCTATAGAGTTACAGGCTCGCTA TGCTGATAAGACTAAGCAAGAATTAGAAGAGCTAGATAATAAACAACAATATAGTTTGACAGGTAGAGTAGTTCTACGCC GTGTCATGGGTAAAGCATCTTTTATAACACTACAAGATTATACTGGTAGAATCCAAGTTTATCTAAAAAAGAGTGACTTG CCAGATGGGCAATATGAAACTTTTAAGAATCTATGTGACTTGGGTGATATAGTTGGTATTACTGGTACTATGTTTAAGAC AAATACTGGTGAACTTTCTGTTGAAGCAAATCACTTTGAGATTTTGACAAAGGCAATTCGTCCTTTGCCTGATAAATTCC ATGGTTTGGCAGATCAAGAAATGAGATATCGTCAAAGATATGTTGATTTAATTACAAATGAAAAGGCAAGAGAAGTCTTT AAAGTACGCTCAAAAGTTGTGAACTTTATCCGTAACTATTTTGATAGACTAGATTTTATGGAAGTAGAGACGCCGATGAT GCATGTTTTGCAAGGTGGTGCTGCTGCTAAGCCATTTAAAACTCATCACAATGCTTTGGATATGCCTTTATATTTGCGTA TTGCTCCAGAACTTTATCTAAAAAGACTAGTTGTTGGTGGTTTTGAGCGAGTTTATGAGATAAACCGTAATTTTAGAAAC GAAGGTGTATCTTCACGCCATAATCCAGAATTTACAATGCTAGAGTTCTATATGGCGTATGCTGATTATAATGACCTTAT GGATCTAACAGAAGATATGCTATCTAAACTTGTACAGGAAGTAATTGGTAGCGAGATACTTGAGTATGGTGAGTATAAAA TCAACTTTGGTGGTAAGTACGAACGAATCTCAATGGTTGACTCAATTGTTAAGTATAATGATGATATTACCAAAGAAGAT TTAGTAACATTTGAATCTGCTAAAAAGATTGCTGAGAAACTAAAAATAAAAGTTGAAGCTTACCATGAACTTGGACATTT GATAAACGAAATATTTGAAGAAACTGTCGAGCATCAGCTTATTCAACCGACATTTATTACAGATTATCCAGCTGTAGTTT CACCATTGGCGCGTAGACAAGACGGTAACCCTGAGTTTACCGATAGATTTGAGTTCTTTATTGGAGCACGTGAAGTTGCT AACGGCTTCTCTGAGCTAAATGATGCTGAAGATCAAGCAGAGCGTTTCAGAAAACAGGTTGAAGCTGCGGCATCTGGAGA TGATGAAGCTATGCCTTATGACAAAGACTATATCCGCGCACTAGAGTATGGTATGCCTCCTACAGCGGGACAAGGAATCG GTATTGATAGACTGGTAATGTATCTAACAAACTCTCAATCAATTAGAGATGTGATTCTATTTCCGCATATGAAGCCTGAG TAA Protein sequence : MSSKLKDLIKTTIKEYLEANDITVKDAIRGKIREQISEFLGEVSEINEQVKEQISALVKKHVTELQESSQIALRKEKLKT LAQQNNGISHPNSFRRNAVAIELQARYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITLQDYTGRIQVYLKKSDL PDGQYETFKNLCDLGDIVGITGTMFKTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVF KVRSKVVNFIRNYFDRLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRN EGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERISMVDSIVKYNDDITKED LVTFESAKKIAEKLKIKVEAYHELGHLINEIFEETVEHQLIQPTFITDYPAVVSPLARRQDGNPEFTDRFEFFIGAREVA NGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILFPHMKPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-138 | 56 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-85 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_001122668.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-138 | 56 |
