Gene Information

Name : Bcep1808_0072 (Bcep1808_0072)
Accession : YP_001117930.1
Strain :
Genome accession: NC_009256
Putative virulence/resistance : Virulence
Product : lytic transglycosylase catalytic subunit
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 80547 - 81080 bp
Length : 534 bp
Strand : +
Note : PFAM: Lytic transglycosylase, catalytic; KEGG: bam:Bamb_0053 lytic transglycosylase, catalytic

DNA sequence : 
ATGATACGGGCGACGCGTTTCCAGTCGTACGCCGAACAGACACGGGTTTTCCCGAGCATTTCACCTATTCGTCACCGCTT
GCGCACTATGAACAGACGGTTCGCTTCGATCGCGCTGATCGCCGCCGGCGCAGGGTTCGCCTGCGGCAACGCTCGCGCCG
ATTGTTTCGACGAAGCCGCCCGGTATCAGAAGGTCAATCCGCTGATCCTGCGCGCGATCGCGTGGCAGGAGTCGCACAAC
CGGCCCGACGCGCTGAACAAGAATACGAACGGCTCCGTCGACTACGGGCTCATGCAGATCAACTCGATCCATCTGCAGAC
GCTGTCGCGTTACGGGATCGGCCGCGACACGCTGATGGAGCCGTGCAAGAACGTCTACATCGCCGCGTGGCATCTGCGCC
AGAAGATGAATCGCTACGGCAACAGCTGGCAGGCGGTGGGCGCCTATCATTCGGAAACGCCGTCGCTGCGCGACAAGTAT
GCGCGGCAGATCGCCGGCATCCTGTCGCAGTGGAAGCTGCTGCCGCAGCAGTGA

Protein sequence : 
MIRATRFQSYAEQTRVFPSISPIRHRLRTMNRRFASIALIAAGAGFACGNARADCFDEAARYQKVNPLILRAIAWQESHN
RPDALNKNTNGSVDYGLMQINSIHLQTLSRYGIGRDTLMEPCKNVYIAAWHLRQKMNRYGNSWQAVGAYHSETPSLRDKY
ARQIAGILSQWKLLPQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpa2 NP_640772.1 Hpa2 protein Virulence Hrp PAI Protein 5e-37 65
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 1e-14 41
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 1e-14 41
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 1e-14 41
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 1e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcep1808_0072 YP_001117930.1 lytic transglycosylase catalytic subunit VFG0539 Protein 3e-15 41