Gene Information

Name : Bcep1808_0069 (Bcep1808_0069)
Accession : YP_001117927.1
Strain :
Genome accession: NC_009256
Putative virulence/resistance : Virulence
Product : general secretory pathway protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 75286 - 76785 bp
Length : 1500 bp
Strand : -
Note : KEGG: bam:Bamb_0051 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase

DNA sequence :
GTGAGCGACGTGCTCGCGTCCGCGCCCCAGGACGGCGCGCCGGGCGAACGGCAGCCGCCGTCGCCGCTCGCCGCCCGCCT
GCTGCCGTACGGCTTCGCGAAGAGCGGCCAGGTGCTGATCGCGCACCAGCTCGACGATACGCTCGAGGTGTGGATCAGCG
AACGCACGAGCGACGCGGCGCTCGCCGAGATCGCCCGCAACTTCGGTTCGATCGTCGTGCAGCGCGTGCCGGCCGACGAG
CTCGCGCAGGCGATCAACCACGCGTACGCGCGCCAGGACGGCAGCGCCGCGCAGATCGTCGGCGAGGTCGAAGGCGAAGT
CGACCTGTCGCGGCTGATGCAGGACATCCCCGAAGTCGAGGATCTGCTCGAATCGGAAGACGACGCGCCGATCATCCGCA
TGATCAACGCGCTGCTCACGCAGGCCGCGCGCGAGCAGGCGTCGGACATCCACATCGAGCCGTTCGAGAATGCGTCGGTC
GTGCGGTTTCGCGTCGACGGCACGCTGCGCGACGTCGTGCGCCCGAAGAAGGCGCTGCACGGCGCGCTGATCTCGCGGAT
CAAGATCATGGCGCAGCTCGACATCGCCGAAAAACGCCTGCCGCAGGACGGCCGCATCACGCTGCGCGTCGGCGGCCGCC
CGGTGGACGTGCGCGTGTCGACGCTGCCGACCGGGCACGGCGAGCGCGCGGTGCTGCGTCTGCTGGAAAAGGACGCGCAG
CGCCTGAACCTCGAAGCGCTCGGGATGGGCCGCGACACGCTCGTCCAGTTCGACAAGCTGATCGCCCGCCCGCACGGGAT
CGTGCTGGTGACGGGGCCGACCGGCTCCGGCAAGACGACGACGCTGTACGCGTCGATGTCGCGGCTCGAAACGGCGACGA
CCAACATCATGACGGTCGAGGATCCGATCGAATACGACCTGTCCGGCATCGGCCAGACGCAGGTCAACGAGCGGATCGGG
ATGACGTTCGCCCGCGCGCTGCGCTCGATCCTGCGCCAGGATCCGGACGTCATCATGATCGGCGAAATCCGCGACCTCGA
AACCGCGCAGATCGCGGTGCAGGCATCGCTCACGGGCCACCTGGTGCTGGCGACGCTGCATACGAACGACGCCGCGTCGG
CCGTCACGCGGCTGACCGACATGGGCGTCGAGCCGTACCTGCTCGCGTCGTCGCTGCTCGGCGTGCTCGCGCAGCGGCTG
GTGCGCCAGCTGTGTCCGGTGTGCAAGGAAGAGCGGCACGAGGACGGCCGCAGCGTGTGGCATCCGGTCGGCTGCGACAA
GTGCGGCCATTCGGGCTACACGGGCCGGCGCGGCGTGTACGAACTGCTGGTGGTCGACGATGCGATCCGCTCGCTGATCC
ATCGCAACGCGGCCGACGCGGAGATCCTCGCCACCGGCCGCGCGCAAGGCATGCGCACGCTGCGCGACGATGCCGAGCGC
TGGCTCGCGGCCGGCGCGACGTCGCTCGAGGAAGTGCTGCGCGTGACGGGAGGCGCATAG

Protein sequence :
MSDVLASAPQDGAPGERQPPSPLAARLLPYGFAKSGQVLIAHQLDDTLEVWISERTSDAALAEIARNFGSIVVQRVPADE
LAQAINHAYARQDGSAAQIVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASV
VRFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQ
RLNLEALGMGRDTLVQFDKLIARPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIG
MTFARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRL
VRQLCPVCKEERHEDGRSVWHPVGCDKCGHSGYTGRRGVYELLVVDDAIRSLIHRNAADAEILATGRAQGMRTLRDDAER
WLAAGATSLEEVLRVTGGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 3e-117 53
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-117 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcep1808_0069 YP_001117927.1 general secretory pathway protein E VFG0182 Protein 3e-125 56
Bcep1808_0069 YP_001117927.1 general secretory pathway protein E VFG2048 Protein 3e-117 53
Bcep1808_0069 YP_001117927.1 general secretory pathway protein E VFG1876 Protein 3e-119 52
Bcep1808_0069 YP_001117927.1 general secretory pathway protein E VFG0233 Protein 1e-86 49
Bcep1808_0069 YP_001117927.1 general secretory pathway protein E VFG2426 Protein 1e-76 48
Bcep1808_0069 YP_001117927.1 general secretory pathway protein E VFG0112 Protein 1e-80 44