Gene Information

Name : Bcep1808_0553 (Bcep1808_0553)
Accession : YP_001118400.1
Strain :
Genome accession: NC_009256
Putative virulence/resistance : Virulence
Product : type II secretion system protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 607944 - 609188 bp
Length : 1245 bp
Strand : -
Note : PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: bam:Bamb_0481 type II secretion system protein E

DNA sequence :
ATGCAGCGGCCGCCGCTCTCCTCCGCCGCGTCGTCGGCCGCGCCGCCGCGCTCGCTCGATGCCGCGCAGCTCGACGACTC
CCCCGCGGTACGGCTGCTCACCGATACGCTGCATGCCGCGCGCGTACGCGACGCGTCCGACATCCACGTCGAACCGTTCG
AAACGGGCTGGCGCATCCGACTGCGCATCGACGGCGTGCTGCACGAGCACCTGCGCCCGCCGGTTCATCTGCGCGACGCG
GTCGTCACGCGGATCAAGGTGCTCGCCCGGATGGACATCGCCGAGCGGCGGCTTCCGCAAGACGGCCGGCTGCGCATTGC
GATCGACGCCGGCAAGCGCGGCGACTACCGGGTCAGCTCGTTGCCCACGCTGTTCGGCGAGAAGCTCGTGCTGCGCCGCC
TCGAGACGCTGCCGCCCGACCTCACGCTCGCGCGCCTCGGTTTCGACGCGCGTCAGGCCGCGGCGATGGAGGCCGCGATA
CGTGCGCCGCACGGCCTCGTGCTCGTGACCGGGCCGACCGGCAGCGGCAAGACGCTGTCGCTCTATTGCGCGCTGCAGAT
GCTCGATCGGGACGCGCACAACGTCTGCACGGTCGAGGATCCGGCCGAGATCCAGCTCGACGGCATCAACCAGGTCGGCG
TCGCGGAAAAGGCCGGCCTCACCTTCGCCACCGCACTGCGTGCGCTGCTGCGACAGGATCCGGACGTCATCATGGTCGGC
GAGATTCGCGATGCGGAGACGGCCGACGTCGCGCTGAAGGCCGCGCAGACGGGCCACCTCGTGCTGTCGACCCTGCATAC
GAACGACGCCCCGGCAGCAGTCGCACGGCTGCTCGACATCGGCGTCGCGCCGTACAACCTTGCGGCCGCGTTGCGCCTCG
TGACCGCGCAGCGCCTCGTCCGGCGCCTGTGCACCGCGTGCCGCGTGCGTTCCGATGCACCGGCAAGCGTGCTGCGCGAA
GCCGGTTGCGATGCCGCCGCGCTGGCGTCCGGCTGGCGGCCGTTCGTCGCGCGCGGTTGTGCCGCCTGCCACGGCATCGG
CTATCGAGGGCGGATCGGTCTGCATCAGACGATGCCGGTGTCGGCCGAGATGGCGGAGCGCATCGTCGCGCGCGCAAGCG
TCGGTGCGCTGGCGCAATGCGCCGCGGCCGAAGGCGTGCGCAACCTGCGCGACGCGGCGCTCGCGCACGTTCGCGACGGC
ACGACGAGTATCGCGGAAGCGCTTGCCGCGACGCCGGACGCATGA

Protein sequence :
MQRPPLSSAASSAAPPRSLDAAQLDDSPAVRLLTDTLHAARVRDASDIHVEPFETGWRIRLRIDGVLHEHLRPPVHLRDA
VVTRIKVLARMDIAERRLPQDGRLRIAIDAGKRGDYRVSSLPTLFGEKLVLRRLETLPPDLTLARLGFDARQAAAMEAAI
RAPHGLVLVTGPTGSGKTLSLYCALQMLDRDAHNVCTVEDPAEIQLDGINQVGVAEKAGLTFATALRALLRQDPDVIMVG
EIRDAETADVALKAAQTGHLVLSTLHTNDAPAAVARLLDIGVAPYNLAAALRLVTAQRLVRRLCTACRVRSDAPASVLRE
AGCDAAALASGWRPFVARGCAACHGIGYRGRIGLHQTMPVSAEMAERIVARASVGALAQCAAAEGVRNLRDAALAHVRDG
TTSIAEALAATPDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 5e-66 46
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-66 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcep1808_0553 YP_001118400.1 type II secretion system protein E VFG2426 Protein 1e-128 79
Bcep1808_0553 YP_001118400.1 type II secretion system protein E VFG0233 Protein 7e-88 51
Bcep1808_0553 YP_001118400.1 type II secretion system protein E VFG0182 Protein 7e-65 47
Bcep1808_0553 YP_001118400.1 type II secretion system protein E VFG2048 Protein 1e-65 45
Bcep1808_0553 YP_001118400.1 type II secretion system protein E VFG1876 Protein 3e-61 42