Gene Information

Name : Bcep1808_2622 (Bcep1808_2622)
Accession : YP_001120451.1
Strain :
Genome accession: NC_009256
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 2903205 - 2904707 bp
Length : 1503 bp
Strand : +
Note : PFAM: Integrase, catalytic region; KEGG: bch:Bcen2424_3299 integrase, catalytic region

DNA sequence :
ATGCTGGCCAAGATCAGGCGGATGTATTTCCGCGAGAAGGTGCCGTTGCGGGAGATCGCGCGGCGAACGGGGTTGTCCCG
AAACACGGTACGGACATGGCTAAAACAGCCGGAAGCGGCAGAGCCGAAGTACCCGAAACGGGTCAGTCCGAGCGTGGTGG
ACGAATGGGCCGGGCAGCTTGAGGAATGGCTGCGCACGGACAGCCACCGCCCGAAACGGGACCGGCGCACGGCGCGGTTC
ATGTTCGAGGCGATCCGCGCGCAGGGATTCAGCGGAAGCTATACGCGCGTGAGCGAGTTCGCGCGACGCTGGCGCGAGCA
GCAGACGCAGGCTCCGCGCCGACAGGCCTACGTGCCGCTGGCGTTTGAGCTGGGCGAGGCCTTCCAGTTCGACTGGAGCT
GCGAATACGTCTTCGTCGGCGGACTGCGCCGACGCCTTGAGGTCGCCCATGTGAAGCTGAACGCGAGCCGCGCGTTCTGG
CTGGTAGCCTACCCGACCCAGAGTCACGAGATGCTGTTCGACGCGCACGCGAAGGCGTTCGCCGCGTTCGGCGGCGTACC
GCGCCGGGGCATCTATGACAACATGAAGACGGCCGTGGACAAGGTCGGGCGTGGCAAGGCGCGCACGGTCAACGCCCGCT
TCGAGGCGATGTGCAGTCACTACCTGTTCGAGCCGGAGTTTTGCAATCGCGCGGCCGGGTGGGAGAAAGGCATCGTCGAG
AAGAACGTGCAGGATCGGCGTCGGCAGATCTGGCATGAAGCGGCCCAGCAGCGCTGGGCGTCGCTGGAAACGCTGAACGA
CTGGGTGTCGCAGCGGTGCCGCCAGGCTTGGCAGATGCGGCATCCGCAGTGGCCGGAGTTGACGGTCGAGGACGTGTTGC
AGGACGAGCGCACGCGCCTGATGCCGAACCCGCGTCCGTTCGACGGCTACGTCGAGCAGTTCCTGCGCGTGTCGTCGACC
GGCCTGATCCACTTCCAGCGCAACCGCTACAGCGTGCCGACCGAGTTCGTGAACCAGCTCGTGAGTGTGCGCAGCTATCC
GGCGTGGCTAAGCGTGGTCGCCGACGACCGGGAGATCGCCCGTCACACGCGCAGCTTCGAGCGGCACATGACGTTCTACG
ACTGGCAGCACTACATCACGCTGGTCGAGCGCAAGCCCGGTGCGCTGCGCAACGGCGCACCGTTCGCGACGATGCCGCAG
CCGCTTCAGGACTTGCAGCGGCATCTGCTGAAGCATCCCGGCGGGGATCGCGTGATGACCGAGGTGCTGAGCGCGGTGCG
CGAGCACGGACTCGATGCGGTGTTGCTGGCCGCGCAGACCGCGCTCGACTCGGGCCGCCCCAGTGGCGATCACGTCCTCA
ACGTATTGAGCCGCCTGAAGGCTCCGGCCGACCGGAAGGTCATGGCCGTCACCGCACTCAACCTGAACGAAGAACCTGTC
GCGGATGTCGGCCGCTATGAACGCCTGCGCGCAACCGAACCGGAGCACCGCCATGTCCAATGA

Protein sequence :
MLAKIRRMYFREKVPLREIARRTGLSRNTVRTWLKQPEAAEPKYPKRVSPSVVDEWAGQLEEWLRTDSHRPKRDRRTARF
MFEAIRAQGFSGSYTRVSEFARRWREQQTQAPRRQAYVPLAFELGEAFQFDWSCEYVFVGGLRRRLEVAHVKLNASRAFW
LVAYPTQSHEMLFDAHAKAFAAFGGVPRRGIYDNMKTAVDKVGRGKARTVNARFEAMCSHYLFEPEFCNRAAGWEKGIVE
KNVQDRRRQIWHEAAQQRWASLETLNDWVSQRCRQAWQMRHPQWPELTVEDVLQDERTRLMPNPRPFDGYVEQFLRVSST
GLIHFQRNRYSVPTEFVNQLVSVRSYPAWLSVVADDREIARHTRSFERHMTFYDWQHYITLVERKPGALRNGAPFATMPQ
PLQDLQRHLLKHPGGDRVMTEVLSAVREHGLDAVLLAAQTALDSGRPSGDHVLNVLSRLKAPADRKVMAVTALNLNEEPV
ADVGRYERLRATEPEHRHVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAN85144.1 unknown Not tested Hrp PAI Protein 1e-145 57
EC042_4098 YP_006098381.1 transposase Not tested Tn2411 Protein 2e-112 49
istA AAN62228.1 putative transposase Not tested PAGI-3(SG) Protein 3e-89 43