Gene Information

Name : Bcep1808_1523 (Bcep1808_1523)
Accession : YP_001119365.1
Strain :
Genome accession: NC_009256
Putative virulence/resistance : Virulence
Product : small multidrug resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 1642849 - 1643187 bp
Length : 339 bp
Strand : +
Note : PFAM: small multidrug resistance protein; KEGG: bam:Bamb_1460 small multidrug resistance protein

DNA sequence : 
ATGCAACTGCCCGGTTACGCATGGCTCGCGATCGCGATCGTCGCGGAAGTGGTCGGCACATCCGCGCTGCGCGCGGCCGA
CGGCTTCACGCGCTTCTGGCCGTCGGCGCTGGTCGTCGCCGGCTACGGGATCGCGTTCTACTGCCTGTCGCTCACGTTGC
GCACGATGCCCGTCGGCATCATCTACGCGGTGTGGTCGGGCGCCGGCATCGTGCTGATCACGCTCGTCGCGATGCTGCTG
TATCGCCAGGTGCCCGACGTACCGGCGGTGATCGGCCTCGGGCTGATCGTCTCGGGCGTCGTGGTACTGAACCTGTTCTC
GAAGATGCAGGCGCACTGA

Protein sequence : 
MQLPGYAWLAIAIVAEVVGTSALRAADGFTRFWPSALVVAGYGIAFYCLSLTLRTMPVGIIYAVWSGAGIVLITLVAMLL
YRQVPDVPAVIGLGLIVSGVVVLNLFSKMQAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 4e-18 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcep1808_1523 YP_001119365.1 small multidrug resistance protein CP001138.1.gene1489. Protein 8e-16 56
Bcep1808_1523 YP_001119365.1 small multidrug resistance protein NC_010410.6003348.p0 Protein 8e-16 55
Bcep1808_1523 YP_001119365.1 small multidrug resistance protein BAC0002 Protein 8e-16 55
Bcep1808_1523 YP_001119365.1 small multidrug resistance protein BAC0377 Protein 3e-19 53
Bcep1808_1523 YP_001119365.1 small multidrug resistance protein CP004022.1.gene1549. Protein 7e-16 47
Bcep1808_1523 YP_001119365.1 small multidrug resistance protein NC_002695.1.913273.p Protein 2e-11 47
Bcep1808_1523 YP_001119365.1 small multidrug resistance protein BAC0139 Protein 4e-13 46
Bcep1808_1523 YP_001119365.1 small multidrug resistance protein BAC0150 Protein 2e-11 45
Bcep1808_1523 YP_001119365.1 small multidrug resistance protein BAC0327 Protein 1e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcep1808_1523 YP_001119365.1 small multidrug resistance protein VFG1586 Protein 2e-18 45