Gene Information

Name : Bcep1808_4056 (Bcep1808_4056)
Accession : YP_001116502.1
Strain :
Genome accession: NC_009255
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 849565 - 850230 bp
Length : 666 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bam:Bamb_5325 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGCATTCTCGTCGTCGAGGACGATGCCGAAATCGGCGCGGCGATCCGCGCGCGGCTCACGCGGCTCGGCCATGCGGT
CGACCACGAAACCGACGGCGCGACCGCCAACAGCCTGCTGCGCGTCGAGCGCTTCGATCTCGTCGTGCTCGATGCGAACC
TTCCCGGCCTCGACGGCTTCGCCGTGCTGCGCAACCTGCGTGCGGCGGGCAGCACGACGCCGGTGCTGCTCGTCACCGCG
CGCTCGGCGATCGACGACCGCGTGAGCGGCCTCGGCCTCGGCGCCGACGACTACCTCGTGAAGCCGTTCGACTACCGCGA
GCTCGATGCGCGCGTGCAGGCGCTGCTGCGCCGCAACAGCGGTCATGCGAACGACGTGCTGACGCTCGGCGGCCTCGTGA
TCGACCGCAGCAGCCGGCTCGCGGAGCTCGACGGCCAGCCGCTGTCGCTGTCGCGCCAGGAGTTCGCACTGCTCGAGATT
CTCGCGAGCCGCCCGCAGCGAATCTTCTCGAAGGACGAGCTGCTGAACCAGCTGTTCAGTTTCGGCAACGAGCCGAGCGC
GAATGCGGTCGAGCAGTACGTGACGCGCGTGCGCAGGAAGCTGCACGGCAGCTCGGTCGAGATCCGCACCGCGCGCGGGA
TGGGGTATCAGATTGCCGCGCACTGA

Protein sequence : 
MRILVVEDDAEIGAAIRARLTRLGHAVDHETDGATANSLLRVERFDLVVLDANLPGLDGFAVLRNLRAAGSTTPVLLVTA
RSAIDDRVSGLGLGADDYLVKPFDYRELDARVQALLRRNSGHANDVLTLGGLVIDRSSRLAELDGQPLSLSRQEFALLEI
LASRPQRIFSKDELLNQLFSFGNEPSANAVEQYVTRVRRKLHGSSVEIRTARGMGYQIAAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 9e-35 44
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcep1808_4056 YP_001116502.1 two component transcriptional regulator BAC0083 Protein 4e-34 42
Bcep1808_4056 YP_001116502.1 two component transcriptional regulator BAC0638 Protein 3e-29 42
Bcep1808_4056 YP_001116502.1 two component transcriptional regulator NC_002516.2.879194.p Protein 2e-36 41
Bcep1808_4056 YP_001116502.1 two component transcriptional regulator BAC0197 Protein 1e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcep1808_4056 YP_001116502.1 two component transcriptional regulator VFG0596 Protein 8e-33 41
Bcep1808_4056 YP_001116502.1 two component transcriptional regulator VFG1390 Protein 2e-34 41