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Name : Bcep1808_3681 (Bcep1808_3681) Accession : YP_001116131.1 Strain : Genome accession: NC_009255 Putative virulence/resistance : Unknown Product : sigma-54 dependent trancsriptional regulator Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 428913 - 430895 bp Length : 1983 bp Strand : + Note : KEGG: bam:Bamb_4843 sigma54 specific transcriptional regulator, fis family; TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; Propionate catabolism acti DNA sequence : ATGGACCTCTCCTCGACCACGCCCGCCGGCCCGACCGACCGCGCGGTGCGCCCACGCATCTGGGCGATGGGCATCAGCCG GCTGCGCGACCTGTTCCGCGAGATCGCCGGCGAATTCGACGAACGCGCCGACGTGCGCATCGTCACGCGCGCGTACGAAG ACGCGCTGAGCGCGATCGCCGAAGCCGGCACCGCGCGGCCCGACGTGATCGTCGCGGCCGGCTCGAACGGCGGCTTCCTG AAAACGCGCGCGCAGGTGCCGGTGGTGGTCGTGTCGCCGACCGGCTTCGACGTGATGCAGGCGCTCGCGCGCGCGCGTCG GGACGCGACCCGCATTGCGCTCGTCAGCGCCGGCGAGACGCCGCCCGAAGTGCGCCGCTTCGTCGCCGCGTACGGGCTCG ACGTGCAGTTTGCGTCATATCAGTCCGCGCAGGAAGCGGAGGCGTGCGTGCACGACCTGCACGACCGCGGCATCGAGACG ATCGTCGGCCCCGGCCTCGTCACCGATCTGGCGGCGAGCGCGGGCATGGGCGCGGTATTCCTGTATTCGCACGCGTCGGT GCGTCAGGCGGTCGAGACCGCGCTCGAAGTCGCGTATGCAACCCACGCCGAGGCGTTTCGCCGGCAGCGGCTCGACAACC TGCTGCAGCATCTGCGCGACGGCGTCGTCGCGCTCGATGCGCGCGGGCGGGTGGAGGCGATCAACGAGCGGCTCGCGTCG GCGCTCGGAGTCGAACCCGCGGCGGCCGTCGGCCGCGCGCTCGTCGATCTCAGGCCGGAGCTGCGCACGCTACGCGGCGA AGACGGCGATGCGCTCGCGACCGTGCGCGGCGTGAGATACGTCGTGCATCGCGGGCCGCTCGTCGATCGCGGCGTGACGT CCGGCAGCGTGCTGACGTTCCAGGAGTCGCGCGCGGTGGAGCGGCTCGACCGCGCGCTGCGTTCGCAGCCGAACACGCAG CAGTTCGCGGCGCGCTACACGCTCGACGACGTGATCGGCGCGTCCGCGCCGATGGCGCGCGTGCGCGACCTCGTGCGCCG CTACGCGAAATCCGACGCGACCGTGCTGGTGCTCGGCGAAAGCGGCACCGGCAAGGAGATGATCGCGCAGAGCCTGCATG CGCTGTCGGCGCGGCGCAATTACCCATTCGTCGCGGTCAACTGCGGCGCGTTTCCGGAGGCGCTGCTCGAAAGCGAGCTG TTCGGTTACGAGGAAGGCGCGTTCACCGGCGCGCGGCGCGGCGGCAAGACGGGGCTGTTCGAGGCCGCGCACCGCGGCAC GCTGTTTCTGGACGAAATCGGCGAGATGCCGCCGTCGCTGCAAAGCCGGCTGCTGCGGGTGCTGCAGGAGCGCGAGGTGA TCCGCCTCGGCTCGACCGAGCCGATCCGGATCGACGTGCGCGTGATCGCCGCGACGCACCGGCCGTTGCTGGCGGCCGTC GAAGCCGGCACGTTCCGCGCGGATCTGTATTACCGGCTCAACATCCTGAACGTGGGCCTGCCGCCGCTGCGCGAGCGCGC GGCCGACATCCCGGCGCTTGCGGCGACGCTGCTCGTGCAGGCCGCGCAGCGCGAGCCGCGGCTCGCCGAGCGCATGCGCG AGCCCGGCGACGCGCTGCGCGTGCTCGGCGCGACGCAATCGACGCTCGCGCGCTATCGATGGCCCGGCAACGTGCGCGAG CTGCAGAACGTGATCGAGCGGATCGCGGTGGAACTAGCCGAGGAAGCCGACGAGAACGATCTGACCGCCGCGTGCCCGGC GCTCGCGCCGGACGCGCTGCGGGCGATCGCGCCCGAGCTGTTCGCGGCGCCGGTCGAGGCCGCGGACGACGACGATGCGC GCACCCTGCACGCGCGCCGCCGTCGCGCGGAAGCCGACGAGATTCGCGCGGTGCTGGATGCGTGCGGCGGCGATCGCGAT CGCGCATGCGCGATGCTCGGGATCAGCAAGACGACGCTGTGGCGCAAGCTCTCGGGTAAGTGA Protein sequence : MDLSSTTPAGPTDRAVRPRIWAMGISRLRDLFREIAGEFDERADVRIVTRAYEDALSAIAEAGTARPDVIVAAGSNGGFL KTRAQVPVVVVSPTGFDVMQALARARRDATRIALVSAGETPPEVRRFVAAYGLDVQFASYQSAQEAEACVHDLHDRGIET IVGPGLVTDLAASAGMGAVFLYSHASVRQAVETALEVAYATHAEAFRRQRLDNLLQHLRDGVVALDARGRVEAINERLAS ALGVEPAAAVGRALVDLRPELRTLRGEDGDALATVRGVRYVVHRGPLVDRGVTSGSVLTFQESRAVERLDRALRSQPNTQ QFAARYTLDDVIGASAPMARVRDLVRRYAKSDATVLVLGESGTGKEMIAQSLHALSARRNYPFVAVNCGAFPEALLESEL FGYEEGAFTGARRGGKTGLFEAAHRGTLFLDEIGEMPPSLQSRLLRVLQEREVIRLGSTEPIRIDVRVIAATHRPLLAAV EAGTFRADLYYRLNILNVGLPPLRERAADIPALAATLLVQAAQREPRLAERMREPGDALRVLGATQSTLARYRWPGNVRE LQNVIERIAVELAEEADENDLTAACPALAPDALRAIAPELFAAPVEAADDDDARTLHARRRRAEADEIRAVLDACGGDRD RACAMLGISKTTLWRKLSGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 2e-102 | 41 |
