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Name : Bcep1808_5440 (Bcep1808_5440) Accession : YP_001117849.1 Strain : Genome accession: NC_009255 Putative virulence/resistance : Unknown Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 2396010 - 2398349 bp Length : 2340 bp Strand : + Note : PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: bam:Bamb_4345 lysine decarboxylase DNA sequence : ATGACCGCTTCCTTGACCCAACCGGCATTGCGCCGCCTCGGGATGAAGGCGCTGCTCGTGCAGCACGACATCGACGAACG AACCGCGACCGGCCGCGCCGCCACCGCGCTCGCCGAAGAATTGCGCACGCGGCTCGTCGACGTCGTGATCGCGACCTCCG CCGACGACGCGTGCGCGGTGGTCGTCGCCGATCCGGCGATCCAGTGCCTGCTGCTCAACTGGGAACTCGGCAACGATCCG GCCCACGCGCCCGCGCAGGCCGTGCTCGACGCGATGCGCGCGCGCAACGCGACGGTGCCGGTGTTCCTGCTCGCGAGCCG CGCGAGCGCGGCCGCGATTCCGGTCGACGCGATGCGCAAGGCCGACGACTTCATCTGGATGCTCGAGGACACCACCGCGT TCATCGGCGGGCGGATCGTCGCCGCGATCGAACGCTACCGCGAGACGGTGCTGCCGCCGATGTTCCGCGCGCTCGCGCAG TTCTCGCGCGTGTACGAATACTCGTGGCACACGCCGGGCCATACGGGCGGCACCGCGTTCCTGAAGTCGCCGGTCGGGCG CGCCTACTTCGAATTCTTCGGCGAAGCGCTGTTTCGTTCGGACCTGTCGATCTCGGTCGGCGAACTCGGCTCGCTGCTCG ACCACTCCGGTCCGATCGGCGACAGCGAGCGCTATGCGGCGCGCGTGTTCGGCGCGCATCGCACGTATCACGTGACGAAC GGCTCGTCGATGTCGAACCGCGTGATCCTGATGGCGAGCGTCACGCGCAATCAGGTCGCGCTGTGCGACCGCAACTGCCA CAAATCGGCCGAGCACGCGATGACGATGTCCGGCGCGATTCCGACCTACCTGATCCCGTCGCGCAACCACTACGGCATCA TCGGCCCGATCATGCCCGAGCGGCTCACGGCCGCGGCCGTGCGGCTCGCGATCGACGCGAACCCGCTGGTGCGCGGCCGC GACGGCATCAGCCCGACGCCCGTGCACGCGCTGATCACGAACTCGACCTACGACGGGCTGTGCTACAACGTCGCGCGCGT CGAGGAGCTGCTCGGCCAGAGCGTCGACCGCCTGCATTTCGACGAAGCCTGGTACGGCTATGCGCGCTTCAACCCGATCT ACCGCGATCGTTATGCGATGCACGGCGATCCGGCGCGGCACGACGCGAGCAAGCCGACGGTGTTCGCGACGCAATCGACG CACAAGCTGCTCGCCGCGCTGTCGCAGGCGTCGTTCATCCATATCCGCGACGGCCGCAATCCGATCGAGCACGCGCGCTT CAACGAGGCGTACATGATGCACGCGTCGACGTCGCCGAACTACGCGATCATCGCGTCGAACGACGTGAGCGCGGCGATGA TGGACGGCCCCGGCGGCGAAGCGCTGACGACCGACGCGATCCGCGAGGCCGTGTCGTTTCGCCGGATGCTGGCGCGCCTG CATGCGGAATACGACGGGAACGACGACTGGTTCTTCGACGGCTGGCAGCCGGACACGGTCGTCGACCGCAAGACCGGGCG ACGCGTGCCGTTCCACGAAGCGGACGAGACGCTGCTCGCGACCGATCCGTCGTGCTGGGTGCTGCATCCGGGCGACACGT GGCACGGCTTCGGCGCGATCGAGGACGACTACTGCATGCTCGACCCGATCAAGGTGTCGATCGTCACGCCGGGCGTCGCG CCGCACGGCGGGCTGATGCCGGTCGGCATTCCCGCGTCGGTGGTGACGGCCTATCTTGACCGGCAAGGGATCGTCGTCGA GAAGACGACCGACTTCACGATCCTGTTCCTGTTCTCGCTCGGCGTGACGAAGGGCAAGTGGGGCACGCTCGTCAACACGC TGCTCGACTTCAAGCGCGACTACGATGCGAACGCGCCGCTCGAGCAAGCGCTGCCGGAGCTCGTCGCGCGCTATCCGGAG CGTTACGGCAAGCTGGGGCTGCGCGAGCTGTGCGATCTGATGTTCGCCGCGATGAGCGACCTGAAGACGACCGAGATGAT GTCGCGCGGCTTCTCGACGCTGCCGCAGCCGGACTACAGCCCGGCCGAGGCGTACGAGCATCTGGTTCACAACGACATCG AGATGCTCGAGCTGTCGGAGATGGCCGGCCGCACCGTCGCGACCGGCGTCGTGCCCTATCCGCCCGGCATTCCGCTGCTG ATGCCGGGCGAGAACGCAGGGCCGGCCGACGGTCCGCTGCTCGGTTACCTGAAGGCGCTCGAACAGTTCGACCGGCGCTT CCCGGGCTTCACGCACGATACGCACGGCGTCGAAGTGGACGACGGCGTGTACCGCATCGCGTGCATCAGGCAGGCGGGCC GCGATAGCGCCGCGCGCTGA Protein sequence : MTASLTQPALRRLGMKALLVQHDIDERTATGRAATALAEELRTRLVDVVIATSADDACAVVVADPAIQCLLLNWELGNDP AHAPAQAVLDAMRARNATVPVFLLASRASAAAIPVDAMRKADDFIWMLEDTTAFIGGRIVAAIERYRETVLPPMFRALAQ FSRVYEYSWHTPGHTGGTAFLKSPVGRAYFEFFGEALFRSDLSISVGELGSLLDHSGPIGDSERYAARVFGAHRTYHVTN GSSMSNRVILMASVTRNQVALCDRNCHKSAEHAMTMSGAIPTYLIPSRNHYGIIGPIMPERLTAAAVRLAIDANPLVRGR DGISPTPVHALITNSTYDGLCYNVARVEELLGQSVDRLHFDEAWYGYARFNPIYRDRYAMHGDPARHDASKPTVFATQST HKLLAALSQASFIHIRDGRNPIEHARFNEAYMMHASTSPNYAIIASNDVSAAMMDGPGGEALTTDAIREAVSFRRMLARL HAEYDGNDDWFFDGWQPDTVVDRKTGRRVPFHEADETLLATDPSCWVLHPGDTWHGFGAIEDDYCMLDPIKVSIVTPGVA PHGGLMPVGIPASVVTAYLDRQGIVVEKTTDFTILFLFSLGVTKGKWGTLVNTLLDFKRDYDANAPLEQALPELVARYPE RYGKLGLRELCDLMFAAMSDLKTTEMMSRGFSTLPQPDYSPAEAYEHLVHNDIEMLELSEMAGRTVATGVVPYPPGIPLL MPGENAGPADGPLLGYLKALEQFDRRFPGFTHDTHGVEVDDGVYRIACIRQAGRDSAAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 5e-123 | 41 |
