Gene Information

Name : Bcep1808_6288 (Bcep1808_6288)
Accession : YP_001115443.1
Strain :
Genome accession: NC_009254
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 860114 - 860776 bp
Length : 663 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A2066 QseB, two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGGGTATTGCTCGTGGAGGACGACAAGCTGATCGGCAGCGGCGTGGAGGACGGGCTGAGCGAGGCCGGCATGACGGT
CGACTGGGCGCACGACGGCCGGCATGCGCAACTGGCGCTCGAAACCACGCCGTACGACCTCGTCGTGCTGGATCTGGGCT
TGCCGCGCATGTCCGGCGTCGAGCTGCTCGCGTGGCTTCGCAAGCGTCGCGACCATACGCCGGTGCTGGTGATGACCGCG
CGCGACACGGTGGCCGATCGCGTGAGCGGCCTGAGCGCGGGCGCCGACGATTATCTCGGCAAGCCGTTCGACCTGACCGA
GCTGGTTGCGCGCTGCCGTGCGCTCGTGCGGCGTTCGCAGGGGCGCAGCACCGACACGATCGAATACGGCGACCTGTCGG
TCGATCCCGCCTTGATGACGGCAACCCGCGGCGCCGAGCGAATCGCGCTGACGTCGCGCGAATGCGCGTTGCTGGTCGAA
CTGCTGTCGAATCAGGGCCGCCCGCTGTCGCGCGCGCAGCTGCAGGACAGCCTGTACGGCTGGAACGAGGAGATCGAGAG
CAATGCGATCGAGGTGCACGTGTCGAACCTGCGCAAGAAGCTCGGCGCCGACCTGATCCGCACGATCCGCGGCGTGGGCT
ACGTGGTGGAGAAGGCGTCGTGA

Protein sequence : 
MRVLLVEDDKLIGSGVEDGLSEAGMTVDWAHDGRHAQLALETTPYDLVVLDLGLPRMSGVELLAWLRKRRDHTPVLVMTA
RDTVADRVSGLSAGADDYLGKPFDLTELVARCRALVRRSQGRSTDTIEYGDLSVDPALMTATRGAERIALTSRECALLVE
LLSNQGRPLSRAQLQDSLYGWNEEIESNAIEVHVSNLRKKLGADLIRTIRGVGYVVEKAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-40 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcep1808_6288 YP_001115443.1 two component transcriptional regulator BAC0487 Protein 2e-39 46
Bcep1808_6288 YP_001115443.1 two component transcriptional regulator BAC0347 Protein 1e-31 43
Bcep1808_6288 YP_001115443.1 two component transcriptional regulator BAC0197 Protein 8e-34 43
Bcep1808_6288 YP_001115443.1 two component transcriptional regulator BAC0111 Protein 1e-32 42
Bcep1808_6288 YP_001115443.1 two component transcriptional regulator BAC0083 Protein 4e-31 42
Bcep1808_6288 YP_001115443.1 two component transcriptional regulator BAC0308 Protein 5e-33 42
Bcep1808_6288 YP_001115443.1 two component transcriptional regulator NC_002516.2.879194.p Protein 4e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcep1808_6288 YP_001115443.1 two component transcriptional regulator VFG1390 Protein 4e-34 43
Bcep1808_6288 YP_001115443.1 two component transcriptional regulator VFG0473 Protein 4e-40 43
Bcep1808_6288 YP_001115443.1 two component transcriptional regulator VFG1389 Protein 2e-26 41