Gene Information

Name : Bcep1808_6160 (Bcep1808_6160)
Accession : YP_001115327.1
Strain :
Genome accession: NC_009254
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 722834 - 724339 bp
Length : 1506 bp
Strand : +
Note : PFAM: Integrase, catalytic region; KEGG: bch:Bcen2424_3299 integrase, catalytic region

DNA sequence :
GTGGGCATATTGGCCAAGATCAGGCGGATGTATTTCCGCGAGAAGGTCCCGCTGCGCGAGATTGCGAGGCGCACGGGCCT
GTCCCGGAACACGGTGCGCAGCTGGCTTCGGCAAACGGATGCCGTTGAGCCGAAGTACCCGAAGCGCGTCAGCCCGAGCG
TCGTCGACGAGTGGGCCGCGCAACTGACGGGCTGGCTGCGGGCAGACAGTCATCGCCCGAAGCGTGACCGGCGCACGGCC
CGGTTCATGTTCGAGGCCATCCGCGGCGAGGGCTACGCCGGCAGCTACGGCCGCGTCAGCGCCTTCGTGAGACGCTGGCA
CGAGGAGCAGGCTGAAGCCCCGCGCAGGAAGGCCTATGTACCGCTGGCCTTCGAACCCGGCGAAGCCTTCCAGTTTGACT
GGAGCTGCGAATACGCCTTCATCGGCGGGTTGCGGCGACGCCTGGAGGTCGCCCACGTCAAGCTCAATGCCAGCCGGGCG
TTCTGGCTGGTCGCCTATCCGACCCAGAGTCACGAGATGCTGTTCGATGCGCACGCCCGCGCATTCGCCGCGTTCGGCGG
CGTGCCGCGCCGCGGCATCTACGACAACATGAAGACCGCCGTGGACAAGGTCGGCCGCGGCAAGGAGCGCGCGGTCAACG
CCCGCTTCGAGGCAATGTGCGGCCATTACCTGTTCGAGCCGGAATTCTGCAACCGTGCCGCCGGCTGGGAGAAGGGCATC
GTTGAGAAGAACGTGCAGGACCGGCGCCGCCAGATCTGGCACGAGGCTGCGCTACGACGCTGGGAAACGCTGGAGCTTCT
GAACGAATGGGTCGCGGGCCAGTGTCGTCAGGCCTGGCAGATGCGGCACCCGCAGTGGCCCGAGCTGACGGTCGAGGACG
TGCTGCAGGACGAGCGCACCAGGCTGATGCCCAATCCACGCCCGTTCGACGGCTATGTCGAGCAGACGCTGCGGGTGTCG
TCGACCAGCCTCATCCACTTTCAGCGCAACCGCTACAGCGTGCCCACCGAGTATACGAACCAGCTGGTGAGCGTGCGCTG
CTATCCGGCATATCTCAGCGTCGTCGCCGACGCCCAGGAGATCGCACGCCACGAACGCAGCTTCGAGCGGCACATGACCT
TCTACGACTGGCGCCATTACATCACGCTGGTTGAGCGCAAACCCGGCGCGTTGCGCAACGGCGCTCCGTTCGTCACGATG
CCACAGCCGCTGCAGCAGTTGCAGCGACACCTACTGAAGCACCCGGGAGGCGATCGCATCATGACGCAGGTGCTCGCCGC
GGTGCGCGAACACGGACTCGATGCCGTGCTGCTTGCTGTGCAGGCAGCGCTGGACTCGGGACGCCCCAGTGGGGAGCACG
TTCTGAACGTGCTGAGCCGGTTGAAGGCGCCCACCACGAGTACCAACCTCGCGACGACGAAACTCCAGCTTACCGAAGAG
CCGGCTGCCGACGTGAGCCGCTACGAAACCCTGCGCGCCAACCCACCGGAGGACCGTCATGTCTAA

Protein sequence :
MGILAKIRRMYFREKVPLREIARRTGLSRNTVRSWLRQTDAVEPKYPKRVSPSVVDEWAAQLTGWLRADSHRPKRDRRTA
RFMFEAIRGEGYAGSYGRVSAFVRRWHEEQAEAPRRKAYVPLAFEPGEAFQFDWSCEYAFIGGLRRRLEVAHVKLNASRA
FWLVAYPTQSHEMLFDAHARAFAAFGGVPRRGIYDNMKTAVDKVGRGKERAVNARFEAMCGHYLFEPEFCNRAAGWEKGI
VEKNVQDRRRQIWHEAALRRWETLELLNEWVAGQCRQAWQMRHPQWPELTVEDVLQDERTRLMPNPRPFDGYVEQTLRVS
STSLIHFQRNRYSVPTEYTNQLVSVRCYPAYLSVVADAQEIARHERSFERHMTFYDWRHYITLVERKPGALRNGAPFVTM
PQPLQQLQRHLLKHPGGDRIMTQVLAAVREHGLDAVLLAVQAALDSGRPSGEHVLNVLSRLKAPTTSTNLATTKLQLTEE
PAADVSRYETLRANPPEDRHV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAN85144.1 unknown Not tested Hrp PAI Protein 1e-129 57
EC042_4098 YP_006098381.1 transposase Not tested Tn2411 Protein 3e-105 50
istA AAN62228.1 putative transposase Not tested PAGI-3(SG) Protein 5e-83 44