Gene Information

Name : Bcep1808_5785 (Bcep1808_5785)
Accession : YP_001114972.1
Strain :
Genome accession: NC_009254
Putative virulence/resistance : Virulence
Product : type IV secretion/conjugal transfer ATPase
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 365812 - 368280 bp
Length : 2469 bp
Strand : +
Note : TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE, TrbE, VirB component of type IV transporter system; KEGG: bxe:Bxe_A2655 type IV secretion system protein VirB4/TraE

DNA sequence :
ATGGCGCGCCTATCGTACGTCGGAGCCGTCGCGAGCCGGGAAGTGCCGCTTGCCAGCTGTATCCCGTACTCGACGCATGT
GACCGACCACGTCATCAAGACCCGCGAAGGCGACTACCTGCAAATCTGGAAGATCGCCGGCATCGCGTTTGAGGCAGCCG
ATCCCACCGACATCCTCGTGCGACACGAGCGATTCAGCCAATTTGTGCGCGGACTGGCGGGAGGCCATGTGGCGCTGTGG
TCGCATCGTCTGCGCCGACGGGTATCGGACCGATTCTCGACGCAGTACGACGACCACTTCTGCGAGGAACTGGCGACGCG
CTACTACGCGAGTTTCTCGGGCTACCGGATGATGGCCAACGAGTTGTATCTGACGGTGGTCTACCGGCCAAACCGCACCC
GCCTCGGCGGTGTCTTCAGCCGTGCGGCGCGCCGTACGCGCGACGATATCCGGCGCGATCAGCTTGACGCACTGAAGATG
ATGTCGGAGCTTGCTGCCCAGGTCGAATCGAGCCTGAAACCCTATGAGCCGGTCGCGCTCGGTGTCTATCGCCGGCCGAG
TCCCGCCGTGGCCACTTCGTTCCGCTATTCGTCAGCGTTGGAACTGCTCGGCTATCTGGTCAATGGCGTCTGGGAACCTG
TGCCCGTGCCAGCTGGCACGATCCGCGAGGCGCTGCCAGTTTCGAGACTCTTTGTGGGTGCCGAGAAAATCGAGATTCGC
ATGCCGACGGCAACGCGGTTCGCGGCGATGCTCGACATCAAGGATTATCCGGAAGACACCGAACCGGGCATGCTCAATGG
TCTGCTGTACGGCGACTGTGAATATATCGAGACGCAAAGCTTCACGATTCTGGATAAACCCACGGCGAAGGAGACATTGG
AGCGGCAGCGCAATCAGCTTATCGCCGGAGAGGACGTCTCCCTGTCCCAGGTCGACGCAATCGACCATGCGCTCGACGAC
CTGATCAACGGGAATTTCGTTCTTGGTGAGTATCACTACTCGCTGGCGGTGCTCGGCGATTCACTCAATGAAGTGTCGTC
CAGCGTCGCGAAGGCACGAACGCAGCTGGCCGATGCCGGATTCCAGACGGCATTGATCGATCTCGTGGCTGATGCAGCCT
GGTTTGCGCAACTACCGGCCAACTGGCGCTACCGACCCCGCGAAGCGAAGCTCACATCGCGCAATTTTTGCGGTCTGGCA
AGCCTGCACAACTTCGCGGCCGGCAAGCGCGACGGCAATCCGTGGGGCGAGGCGATCACGATCGTCAAGACACCCAGTGG
TCAGCCGCTTTATCTGAACTTCCACGCGACACCGGATAAGCACGACTCACTCGACGAGAAGGCACTGGCCAATACGCAGA
TCATCGGCCGGGCGGGAGCGGGCAAGACGGTGCTCGAGCTGTTCTTGCTCGCGATGGCGACCAAGTATGACCTGACGGCG
GTGCTGTTCGACAAGGATCGCGGCACGGAAATCGCGATTCGTGCGATGGGCGGCACCTATACCGTGTTCCGCCGCGGAGA
GCCCACCGGCCTGAACCCGTTCCAGATGGCGCCGGATGAGCCGATGATCGATTTTTGGGAGCGCCTCGTGCGCAAGCTCG
TCAACGTCGGCGAGCCGTTGTCCGCAAAGGACGAACTTGACCTTTCACGTGCCGTGCGAGAGGTGGCACGTATGGATAAG
CCCCTGCGGCGTTTGTCGATGGTGTGGCAACTTCTCCCGAACGTTGGCGAAAACAGCTTGCATGCGCGACTGGCCAAATG
GTGTGTGGGTGGACGTCTGGGGTGGGTACTCGATAATCCGACAGATCGGATCGACCTGGCGCACGCGAAACTGTTCGGCT
TCGATGACACAGAACTGCTGGACGATCCCGAGGTGTCGACGCCCGTGACGATGTACCTGCTGCATCGGACCGAAGACCTG
ATCGATGGGCGACGCTTCATCTATGTGATGACCGAGTTCTGGAAGCGGCTCGGGGACCAGGTCTTCACGGATTTTGCGAG
GAACAAGCAGAAAACAATCCGCAAGCAGAACGGGCTGGGGATTTTTGATACCCAGTCACCGGCCGACGTATTGCGAAGCG
AAATAGCCAGTGCGCTGATCGAGCAGTGTGCGACGTTTTTCTTCCTGCCGAATCCGCGTGCCGACTACGACGATTACGTG
CATGGTTTCAAGCTGACCGAAGCCGAATTCAATATCGTGCGCAACCTGGGCGAGAGCAGCCGCTTGTTCCTCGTCAAGCA
GGGCCATCGCTCCGCGATCGGCCGACTCGATCTCGCCGGGCTTGGCGATGTGCTCGATGTCCTGTCCGGTACGACCGATA
ACGTCGAGTTGCTCGATGCGATTCGTGCCGAAGTCGGGGATATGCCTAAAGACTGGTTGCCTGTTTTTCATGAGCGACTA
GCGAAGCGCCGAGCGGCTCAGGCGAGCTCGCGCTTGTCGCCAGCTCCCGCGTCGGGAGGTGCTCGATGA

Protein sequence :
MARLSYVGAVASREVPLASCIPYSTHVTDHVIKTREGDYLQIWKIAGIAFEAADPTDILVRHERFSQFVRGLAGGHVALW
SHRLRRRVSDRFSTQYDDHFCEELATRYYASFSGYRMMANELYLTVVYRPNRTRLGGVFSRAARRTRDDIRRDQLDALKM
MSELAAQVESSLKPYEPVALGVYRRPSPAVATSFRYSSALELLGYLVNGVWEPVPVPAGTIREALPVSRLFVGAEKIEIR
MPTATRFAAMLDIKDYPEDTEPGMLNGLLYGDCEYIETQSFTILDKPTAKETLERQRNQLIAGEDVSLSQVDAIDHALDD
LINGNFVLGEYHYSLAVLGDSLNEVSSSVAKARTQLADAGFQTALIDLVADAAWFAQLPANWRYRPREAKLTSRNFCGLA
SLHNFAAGKRDGNPWGEAITIVKTPSGQPLYLNFHATPDKHDSLDEKALANTQIIGRAGAGKTVLELFLLAMATKYDLTA
VLFDKDRGTEIAIRAMGGTYTVFRRGEPTGLNPFQMAPDEPMIDFWERLVRKLVNVGEPLSAKDELDLSRAVREVARMDK
PLRRLSMVWQLLPNVGENSLHARLAKWCVGGRLGWVLDNPTDRIDLAHAKLFGFDDTELLDDPEVSTPVTMYLLHRTEDL
IDGRRFIYVMTEFWKRLGDQVFTDFARNKQKTIRKQNGLGIFDTQSPADVLRSEIASALIEQCATFFFLPNPRADYDDYV
HGFKLTEAEFNIVRNLGESSRLFLVKQGHRSAIGRLDLAGLGDVLDVLSGTTDNVELLDAIRAEVGDMPKDWLPVFHERL
AKRRAAQASSRLSPAPASGGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trwK YP_001610476.1 TrwK protein Virulence Not named Protein 5e-167 45
trwK CAD42844.1 TrwK protein Not tested trw-PAI Protein 4e-167 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcep1808_5785 YP_001114972.1 type IV secretion/conjugal transfer ATPase VFG2211 Protein 0.0 49
Bcep1808_5785 YP_001114972.1 type IV secretion/conjugal transfer ATPase VFG2259 Protein 2e-169 45
Bcep1808_5785 YP_001114972.1 type IV secretion/conjugal transfer ATPase VFG0018 Protein 2e-157 43